Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0988 ATGGCTTCTCCCGCTTCCAACGCCGTGCTTCTCGGCGACGTTTACCTGGACGACGTCGCCGCCAAGCCTTCCGGCGTCCACTTCCGCGATAGAACGCGCCGAGGCGCGCTCCGAGCCACCGTCGTGAATCTCCGAAAACCGAAACCGTTCGGAGGCGCCATTCTCAATTTCGGGTGTTCCACGTCGGATGCAAGTTGGAGGAGCTGGAACCCGAGTTCGCTCCACAAGAACTCCTCCTCGTCGTCCTTCGCTTGCTGCTCCGCCGAGGCAACGCCGCATGTTCAGCACCTCGCAACCTCCACCTTCTCGCTTGACCAAACTAATTTTGGTGGCGAGAGGTTGAAGCTGTTTTCGGGGTCATGTTACCTACCACATCCGGATAAGGAGGACACAGGTGGAGAGGATGCACATTTTATTTGCACAGTTGAACAAGCAATTGGTGTTGCAGATGGTGTAGGTGGCTGGGCAGATGTTGGTGTTAATGCTGGACTGTTTGCTCAAGAACTCATGTCCCATTCTGTTAGAGCAATTAACGAGGAACCCAAAGATTTTATTAATCCGGCAAGGGTTTTAGAGAAGGCTCATTCATGTACAAAGGCCAAGGGTTCATCGACAGCTTGTATCATTGCCCTTACTGATACGGGACTACATGCCGTTAATTTGGGTGACAGTGGGTTCATCGTGATTAGAGATGGATGCACCATTTTCAGGTCCCCTGTTCAACAGCATGACTTCAATTTTACATATCAACTGGAGAGTGGCAATGGAGGTGATCTACCCAGCTCTGGGGAGGTCTTTACAATACCTGTTGCCCCAGGAGATGTTGTCGTTGCGGGAACAGATGGATTGTTTGACAATCTGTACAATGATGAGGTTGCTGAAGTTGTTTTACATGCAGTTAGAGCTGGACTAGAACCCCAAGTAACTGCTCAGAAGATAGCAGCACTGGCTCGTCAGCGAGCACTGGACAGGAATAGGCAGACACCATTTTCTACTGCTGCTCAAGAGGCTGGGTTCCGTTATTATGGTGGCAAGCTTGATGACATAACAGTTGTTGTGTCATACTTAACCGGCTCAACTTGTGTGAGTTTTTCGCCATCTTAG 1104 0.5045 MASPASNAVLLGDVYLDDVAAKPSGVHFRDRTRRGALRATVVNLRKPKPFGGAILNFGCSTSDASWRSWNPSSLHKNSSSSSFACCSAEATPHVQHLATSTFSLDQTNFGGERLKLFSGSCYLPHPDKEDTGGEDAHFICTVEQAIGVADGVGGWADVGVNAGLFAQELMSHSVRAINEEPKDFINPARVLEKAHSCTKAKGSSTACIIALTDTGLHAVNLGDSGFIVIRDGCTIFRSPVQQHDFNFTYQLESGNGGDLPSSGEVFTIPVAPGDVVVAGTDGLFDNLYNDEVAEVVLHAVRAGLEPQVTAQKIAALARQRALDRNRQTPFSTAAQEAGFRYYGGKLDDITVVVSYLTGSTCVSFSPS 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0988 367 ProSiteProfiles PPM-type phosphatase domain profile. 120 356 IPR001932 -
Aed7g0988 367 Gene3D - 258 361 IPR036457 -
Aed7g0988 367 PANTHER PROTEIN PHOSPHATASE 1 360 - -
Aed7g0988 367 SMART PP2C_4 107 354 IPR001932 -
Aed7g0988 367 Pfam Stage II sporulation protein E (SpoIIE) 145 354 IPR001932 -
Aed7g0988 367 SMART PP2C_SIG_2 129 356 IPR001932 -
Aed7g0988 367 Gene3D - 127 253 IPR036457 -
Aed7g0988 367 PANTHER PROTEIN PHOSPHATASE 2C 1 360 IPR039123 -
Aed7g0988 367 SUPERFAMILY PP2C-like 121 354 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0988 Aed-Chr7 7586713 7591741 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0988 K17508 - gmx:100784475 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1322 11 18082774 18087411 Aed7g0988 7 7586713 7591741 PCT