Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1322 ATGCCTGGCATTCTCTCAAGGCTGAATGCTACCATTTACTGTCGCATTCCGGAAGCAATATCACGGCAACAAGGAGTGTCAACATCCTCGTACAGAAGTTCAGCCTTGTCTCTTTGTTCTCTGCACTCAGCTTCCTTTTTGCCCGGTTCAACTCATTGCTCTTCAAGTCACACGCTTAACATAAAACCAATGGTTACGGCTTCACATTCCAATGCTGTGCTTGGAGATGTTTGTGTTGGTGGCTTAATCTCGAGTTGTGGTAGTGTGTTAGACTTAAAAGACAGAACTCATAAAGGTCGCTTGACGGGTAGTGTGAATCTAAGGAGACCACAACCCTTGTATGGTTCTTTGAGTTTTGGGTGTTCTGCTTTTGATGCTAATTGGAGGATCCGGGATTCGAGTTTGCTTCATGGATCATGGCTCAAGAATTTCTCGACCCTTTCTTCTGCTTTCTCCTTAGATGGGGCTGCACATGCTGTCTCGTTTGATGGCAGCCCTCCTGATGAACAGCTTGCAAGTTCCTCCTTTTCACCTGACCCAACTGATGTTGGTGACAGGCCCTTGAAGTTGTTGTCAGGGTCTTGTTACCTACCGCATCCAGATAAGGAAGAGACAGGAGGAGAGGATGCTCACTTTATTTGCACGGAAGAACAAGCAATTGGTGTTGCTGATGGTGTAGGTGGCTGGGCAGATGTTGGTGTTAATGCAGGACTGTTTGCCCAGAAACTTATATCCAATTCAGTGAGAGCAATTCAAGAGGAGCCCGAAGGTTCTTTTAATCCAACAAGGGTGTTAAAGAAAGCTCACGCAAATACAGAGGTCAAGGGTTCATCAACAGCTTGTATTGTTGCTCTTACCGATAAGGGACTACATGCTATTAATTTGGGTGACAGTGGATTCATTGTGGTTAGAGATGGATGCACCATTTTCCAGTCCCCTTCTCAACAGCACGACTTCAATTTCCCATATCAGTTGGAAAGTGGCAATGGTGCTGATCTACCCAGCTCTGGTGAGGTTTTTACCGTAGCTGTTGCTTCAGGAGATGTGGTCATTGCTGGAACAGATGGGTTATTTGACAACTTGTACAATAGTGAGATCACTGCAATTGTTGTACATGCAATTAGGGATGGACTAGAGCCCCAAGTAACTGCTCAGAAGATAGCAGCACTGGCACGCCAGCGAGCACTGAACCAGCGTAGGCCAACACCGTTTTCTACTGCTGCTCAAAAAGCTGGACTCCGTTATTATGGTGGCAAACTTGATGACATAACTGTTGTTGTCTCATACATATCAGGATCAGTGACCAAATGA 1311 0.4569 MPGILSRLNATIYCRIPEAISRQQGVSTSSYRSSALSLCSLHSASFLPGSTHCSSSHTLNIKPMVTASHSNAVLGDVCVGGLISSCGSVLDLKDRTHKGRLTGSVNLRRPQPLYGSLSFGCSAFDANWRIRDSSLLHGSWLKNFSTLSSAFSLDGAAHAVSFDGSPPDEQLASSSFSPDPTDVGDRPLKLLSGSCYLPHPDKEETGGEDAHFICTEEQAIGVADGVGGWADVGVNAGLFAQKLISNSVRAIQEEPEGSFNPTRVLKKAHANTEVKGSSTACIVALTDKGLHAINLGDSGFIVVRDGCTIFQSPSQQHDFNFPYQLESGNGADLPSSGEVFTVAVASGDVVIAGTDGLFDNLYNSEITAIVVHAIRDGLEPQVTAQKIAALARQRALNQRRPTPFSTAAQKAGLRYYGGKLDDITVVVSYISGSVTK 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1322 436 PANTHER PROTEIN PHOSPHATASE 48 435 - -
Aed11g1322 436 SMART PP2C_4 181 428 IPR001932 -
Aed11g1322 436 SUPERFAMILY PP2C-like 195 428 IPR036457 -
Aed11g1322 436 Pfam Stage II sporulation protein E (SpoIIE) 219 428 IPR001932 -
Aed11g1322 436 SMART PP2C_SIG_2 190 430 IPR001932 -
Aed11g1322 436 MobiDBLite consensus disorder prediction 164 183 - -
Aed11g1322 436 Gene3D - 201 334 IPR036457 -
Aed11g1322 436 ProSiteProfiles PPM-type phosphatase domain profile. 191 430 IPR001932 -
Aed11g1322 436 PANTHER PROTEIN PHOSPHATASE 2C 48 435 IPR039123 -
Aed11g1322 436 Gene3D - 335 435 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1322 Aed-Chr11 18082774 18087411 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1322 K17508 - gmx:100785804 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1322 11 18082774 18087411 Aed11g1322 11 18082774 18087411 ECH
Aed11g1322 11 18082774 18087411 Aed7g0988 7 7586713 7591741 PCT