Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0979 ATGAGTTCTGTGAATTTGAACACATGGGCACGCCCCAGCTTCATTTTCAACCACGCCGCGACAACAACCAGATCCAGATCCCAATCCCAAACCCCAACCTTCCGTTTTCTTCACGCCGTCAATAAGTTACCGTTACCCGTCACCGTTATTACCACCAAGCGCTCATTCTCTGTCTCTGCGCTGCTCACGAAAGAGGACACCGTGGAGACGGAAGAGAAAGAGAAGCCACCACTCTTCGATTTCAAGAACTACATGATCAGCAAAGCGACCGCTGTTAACCGCGCCCTGGACGACGCCGTTTCGCTCCGCGACCCGCGGAAGATCCACGAGGCGATGCGCTACTCGCTCCTCGCCGGCGGGAAGCGCGTGCGCCCCGTCCTCTGCTTGGCGGCGTGCGAACTCGTCGGAGGAGAAGAAACCACCGCGATGCCCGCCGGCTGCGCCATTGAGATGATCCACACCATGTCGCTCATCCACGACGACCTCCCCTGCATGGACAACGACGACCTCCGCCGCGGCAAGCCCACCAACCACAAGGTGTTCGGCGAGGACGTCGCCGTCCTCGCCGGCGACGCGCTGCTCGCCTTCGCCTTCGAGCACATCGCCGTCTCCACCCGGGGCGCCTCCCCGTCCCGCGTGGTCCGCGCGATCGGGGAGCTTGCCCGCTCGATCGGCTCCGAGGGCCTCGTCGCCGGCCAGGTCGTCGACATCAACTCCGAAGGCCTGGCCGACGTCGGCCTCGAGCGCCTCGAGTTCATCCACGTCCACAAGACCGCCGCGCTCCTCGAGGGCGCGGTGGTCCTCGGCGCCATCCTCGGGGGTGGCGCCGACGAGGAAGTCGAGAAATTGAGGAAATTCGCGCGCTACATTGGATTACTCTTTCAGGTGGTTGATGACATTCTCGATGTCACCAAGTCCTCCCAGGAGTTGGGGAAAACCGCCGGAAAAGACCTCGTGGCTGATAAGGTTACCTATCCCAAGCTTTTGGGGATTGAGAAGTCTAAGGAGTTTGCTGCGAAATTGAACAAAGATGCTCAGGATCAGCTTTTTGGGTTTGACCCTGTTAAAGCTGCTCCTTTAATTGCTTTAGCCAATTACATTGCTTATAGGCAGAACTAA 1119 0.5916 MSSVNLNTWARPSFIFNHAATTTRSRSQSQTPTFRFLHAVNKLPLPVTVITTKRSFSVSALLTKEDTVETEEKEKPPLFDFKNYMISKATAVNRALDDAVSLRDPRKIHEAMRYSLLAGGKRVRPVLCLAACELVGGEETTAMPAGCAIEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAVSTRGASPSRVVRAIGELARSIGSEGLVAGQVVDINSEGLADVGLERLEFIHVHKTAALLEGAVVLGAILGGGADEEVEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSKEFAAKLNKDAQDQLFGFDPVKAAPLIALANYIAYRQN 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0979 372 CDD Trans_IPPS_HT 104 370 IPR000092 GO:0008299
Aed7g0979 372 SFLD Isoprenoid Synthase Type I 84 370 - -
Aed7g0979 372 SUPERFAMILY Terpenoid synthases 82 350 IPR008949 -
Aed7g0979 372 Gene3D Farnesyl Diphosphate Synthase 78 372 IPR008949 -
Aed7g0979 372 Pfam Polyprenyl synthetase 107 341 IPR000092 GO:0008299
Aed7g0979 372 ProSitePatterns Polyprenyl synthases signature 2. 290 302 IPR033749 -
Aed7g0979 372 SFLD Polyprenyl Transferase Like 84 370 - -
Aed7g0979 372 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 1 372 - -
Aed7g0979 372 ProSitePatterns Polyprenyl synthases signature 1. 157 173 IPR033749 -
Aed7g0979 372 PANTHER GERANYLGERANYL PYROPHOSPHATE SYNTHASE, CHLOROPLASTIC-LIKE 1 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0979 Aed-Chr7 7508334 7509452 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0979 K13789 - gmx:100785539 595.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1336 11 18183537 18190161 Aed7g0979 7 7508334 7509452 PCT