Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0806 ATGGAAGGATCATCAACAAACAAAGAGGAAGAGGTTCCAGCTGAGAAGAATGCCACATTCTATTATTTATACCATCCATGCAATTTTCTTCTCAAGGCTGTCTTCAAATGTCTAGGTTTAGAGATCGGAACCAAGAAAATATTAGAACATAAAAGTTTGGAATCTTCTTCTTCAGATTCAGAAGAGGAGGATGAGGATCCTATAACCCTAGAAGGAAACAATAATGCAAGCAACAAGGACCATAAAAGCTGTAGCCAAGAACTGAAGGAAAAGAATTTCACAAAGTTGTGCAGCACAAAAAGCACACTCACTGTAAATGGTAGTTTTCCAGGGCCAACCATTCGTGTTCAGAAAGGTGATACAGCTTTTGTTACTGTCCACAATCAAGGAAGATATGGAGTCACTATTCACTGGCATGGTTTGAGGGAACCAAATGATCCTTGGTCAGATGGACCTGAGTACATAACACAGTGCCCTATTCCGCCAGGAACAAGTTTCACTCAGAAGGCGGCATTCACATTGGAAGAAGGAACACTTTGGTGGCATGCACATAGTAGTTGGACTCGTGCCACTGTCCATGGTGCCATTGTCATTTTGCCTGCCAATGGAACAACATATCCTTTCCCCGAACCTTATGGACAAGAAACTCTTATCATTGGGGAGTGGTATAAGGGAGATGTGATGCAAATTATCAATTCAGCGTTGGCAACTGGTGGCGAGGCCAAAAAATCAGATGCTTACACCATCAATGGCCAACCTGAAACCACATATCGGTTTTTAGTTGATCGTGGAAAGACATATCTTTTCCGCATAATAAATGCAGCAATGAACGAAGAACTTTTCTTTGGGGTTGCTAATCACAACCTAACAGTTGTAGGCATTGATGCTGCCTACACAAAGCCCTTAAACACCAATATCATCATGATAACCCCAGGACAAACAATGGATGTGTTGGTCACAGCAAACCAGCCAAAGGGTCTCTATTACTTTGCTGCTAGTCCTTTCTATGACGGCACTGCTATGTATGACAATACCACCACAACAGCTATTCTTCAGTACAATGGGAACTACACTCCACCACAATCATCATCCTTCATTCCCATGCCTATGCTTCCTGCAGTGAATGACTCAGAAACTGTATTTAATTTTACTAAAAGCTTGAGGGGTTTGGCAAGCCAAGATCACCCTGCCAATGTGCCAACAAATGTGACTAGACAAATTTATATGACAGTATCCATGAACGAATTGCCTTGTCAAAATCCAAATGGAAGTTGTTTAGGACCTAATGGAACAAGACTAGCTTCAAGTCTAAGCGATTTAAGTTTTCAGACCCCACAGATTGATATACTTCAAGCATACTACTGGAACATTTCAGGAGTTTTCAGTGAGGACTTTCCGGATCAACCACTTTTCTTTTACAACTTCACAGGAGATACAGGAAGCAATACTCTAATCCCAAGCACAGGAACCAGGGTTCTAATGTTTGACTATAATGAGGTTGTTGAACTTGTGTGGCAAGGAACTAGTGTTCTCACTGCAGAGAATCATGCCATGCACCTTCATGGTTTTAGCTTCTTTGTGGTGGGTGTAGGGACAGGAAATTTCAACAATGTGACAGACCCAGAATCCTACAATTTGATTGATCCACCAGAAGTCAATACCATTGGTCTTCCCAAGAATGGATGGCTTGCCATGAGATTTGTAGCGAACAATCCAGGGGTATGGTTCATGCATTGTCATCTTGAGAGGCACACTAGCTGGGGTATGCAGACTGTGCTCATTGTGAGAGATGGAGGTACCATGCAAACCAGTTTGGTTCCACCTCCTAACTACATGCCACCTTGTTCTTAA 1851 0.4225 MEGSSTNKEEEVPAEKNATFYYLYHPCNFLLKAVFKCLGLEIGTKKILEHKSLESSSSDSEEEDEDPITLEGNNNASNKDHKSCSQELKEKNFTKLCSTKSTLTVNGSFPGPTIRVQKGDTAFVTVHNQGRYGVTIHWHGLREPNDPWSDGPEYITQCPIPPGTSFTQKAAFTLEEGTLWWHAHSSWTRATVHGAIVILPANGTTYPFPEPYGQETLIIGEWYKGDVMQIINSALATGGEAKKSDAYTINGQPETTYRFLVDRGKTYLFRIINAAMNEELFFGVANHNLTVVGIDAAYTKPLNTNIIMITPGQTMDVLVTANQPKGLYYFAASPFYDGTAMYDNTTTTAILQYNGNYTPPQSSSFIPMPMLPAVNDSETVFNFTKSLRGLASQDHPANVPTNVTRQIYMTVSMNELPCQNPNGSCLGPNGTRLASSLSDLSFQTPQIDILQAYYWNISGVFSEDFPDQPLFFYNFTGDTGSNTLIPSTGTRVLMFDYNEVVELVWQGTSVLTAENHAMHLHGFSFFVVGVGTGNFNNVTDPESYNLIDPPEVNTIGLPKNGWLAMRFVANNPGVWFMHCHLERHTSWGMQTVLIVRDGGTMQTSLVPPPNYMPPCS 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0806 616 SUPERFAMILY Cupredoxins 400 612 IPR008972 -
Aed7g0806 616 Gene3D - 213 392 IPR008972 -
Aed7g0806 616 PANTHER LACCASE 86 615 - -
Aed7g0806 616 SUPERFAMILY Cupredoxins 208 394 IPR008972 -
Aed7g0806 616 Gene3D - 423 616 IPR008972 -
Aed7g0806 616 CDD CuRO_3_LCC_plant 460 598 IPR034289 GO:0005507
Aed7g0806 616 CDD CuRO_2_LCC_plant 215 353 IPR034285 -
Aed7g0806 616 ProSitePatterns Multicopper oxidases signature 2. 578 589 IPR002355 GO:0005507
Aed7g0806 616 ProSitePatterns Multicopper oxidases signature 1. 573 593 IPR033138 -
Aed7g0806 616 MobiDBLite consensus disorder prediction 51 84 - -
Aed7g0806 616 CDD CuRO_1_LCC_plant 88 200 IPR034288 GO:0005507
Aed7g0806 616 Pfam Multicopper oxidase 89 201 IPR011707 GO:0005507
Aed7g0806 616 SUPERFAMILY Cupredoxins 89 224 IPR008972 -
Aed7g0806 616 Pfam Multicopper oxidase 482 597 IPR011706 GO:0005507|GO:0016491
Aed7g0806 616 Pfam Elicitor peptide 1-7 15 67 IPR035176 GO:0045087
Aed7g0806 616 PANTHER MULTI-COPPER OXIDASE 86 615 IPR045087 -
Aed7g0806 616 Pfam Multicopper oxidase 216 356 IPR001117 -
Aed7g0806 616 Gene3D - 56 200 IPR008972 -
Aed7g0806 616 TIGRFAM laccase: laccase 87 615 IPR017761 GO:0046274|GO:0048046|GO:0052716
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0806 Aed-Chr7 6117054 6123944 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0806 K05909 - gmx:100814128 978.008
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0806 7 6117054 6123944 Aed7g0806 7 6117054 6123944 ECH
Aed7g0806 7 6117054 6123944 Aed1g2416 1 20076519 20081259 PCT