Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2416 ATGCGGTCTCTTGAACTCCACGAAAGCCAGGCCGAATTAGAGATAATTGACGTCGGGGTGGAGGTCTCCGACGTGAGTGAGGCCAATTATACAAGACTTTGTTCAACAAAAAGCATATTGACAGTGAATGGACAATTTCCAGGACCAACTATCAGAGCCTACAGAGGAGACACAATCTATGTTGATGTTTACAACAAGGGCAACTTCAATATTACTTTACACTGGCATGGAGTGAAGCAACCAAGGAATCCATGGACAGATGGACCTTCATACATCACTCAGTGTCCCATCCAACCTGGAACAAAATTCACACAGAGGTTGATTTTTACCTTTGAGGAAGGGACCATATGGTGGCATGCTCATAGTGAATGGTTAAGAGCCACTGTCTATGGTGCTATCTATATCTATCCAACTAAGAACACTCCCTACCCTTTTCCCCAACCTGATGCAGAGATTCCAATCATATTTGGAGAATGGTGGACGAGTGATGTCAATGAGGTCTTCAGACAATCTATGGAAAGTGGAGCAGCCCCAAACGTATCTGATGCTCTCACTATAAATGGTCAACCCGGGGATCTGTTACCTTGCTCGAGTCCAGAAGCGTTCAAGTTGAGTGTAGAGCAAGGCAGGACTTATCATCTCCGTGTTGTCAACGCAGCAATGAATCTCATTCTCTTCTTCTCTGTTTCCCAACACAACCTCACTGTGGTTGGAGCTGATGCCGTGTACACCAGGCCATTCACAAGGGACTACATTTGCATATCACCGGGACAAGCAATGGATGTGTTGTTGCATGCCAACCAAGAACCTGGCCACTATTATCTGGCTGCAAGAGCATATTCAAGTGGGCTTGGTGTTGCCTTTGATAACACCACAACCACAGCTAGAGTAGAGTACAGTGGCAACTACACTCCACCTTCATCTCCTTCACTGCCTAACCTCCCGGAGTTTAATGACACGCGTGCAGCTTTGGACTTCATCACAAACTTGAGAGGCTTACTTGAGAGATCCCCCAGCCAGGTGCCAACAAACATCACAACTCAAATAGTGACCACTATTTCTGTTAACACTTTGCCATGCCCAAATGGCAGAAACGACTGCCAGGGAATAAATGGAACCATTTTTTCTGCTAGCATGAACAACATAAGCTTTGCAATCCCCACTATTGACGTACTAAAAGCCTATTACTACCAAATTAATGGGGTGTACGAACCCGGATTTCCAAGATTTCCACCCTTTGTGTTTAACTTCACCGGGGATTTTTTGCCTATAGTTCTGAATACACCAAAGCAAGGGACCAAGGTTAATGTGTTGAACTATGGTGCAGCAGTTGAAATTGTTTTCCAAGGGACAAACCTTGTTGGAGGGATAGACCATCCCATCCATCTCCATGGATACAGTTTCCATGTTGTTGGATATGGGTTAGGCAATTTCAACCAAAGCGTGGACCCCTTGAATTTCAATCTGGTTGATCCTCCTTATTTGAATACAGTGATTGTGCCTATAAATGGCTGGGCTGCCATTAGGTTCGTGGCTATAAACCCTGGAGTATGGTTCATGCACTGCCATCTAGAACGCCACCAGTCTTGGGGCATGGAGACAGTTTTTATAGTGAAGGATGGAGAGCTTGAAAGTCAAAGATTGCCACCACCACCGCCAGACATGCCCCCATGTTGA 1677 0.4544 MRSLELHESQAELEIIDVGVEVSDVSEANYTRLCSTKSILTVNGQFPGPTIRAYRGDTIYVDVYNKGNFNITLHWHGVKQPRNPWTDGPSYITQCPIQPGTKFTQRLIFTFEEGTIWWHAHSEWLRATVYGAIYIYPTKNTPYPFPQPDAEIPIIFGEWWTSDVNEVFRQSMESGAAPNVSDALTINGQPGDLLPCSSPEAFKLSVEQGRTYHLRVVNAAMNLILFFSVSQHNLTVVGADAVYTRPFTRDYICISPGQAMDVLLHANQEPGHYYLAARAYSSGLGVAFDNTTTTARVEYSGNYTPPSSPSLPNLPEFNDTRAALDFITNLRGLLERSPSQVPTNITTQIVTTISVNTLPCPNGRNDCQGINGTIFSASMNNISFAIPTIDVLKAYYYQINGVYEPGFPRFPPFVFNFTGDFLPIVLNTPKQGTKVNVLNYGAAVEIVFQGTNLVGGIDHPIHLHGYSFHVVGYGLGNFNQSVDPLNFNLVDPPYLNTVIVPINGWAAIRFVAINPGVWFMHCHLERHQSWGMETVFIVKDGELESQRLPPPPPDMPPC 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2416 558 Gene3D - 6 137 IPR008972 -
Aed1g2416 558 PANTHER MULTI-COPPER OXIDASE 21 558 IPR045087 -
Aed1g2416 558 CDD CuRO_3_LCC_plant 402 541 IPR034289 GO:0005507
Aed1g2416 558 CDD CuRO_1_LCC_plant 25 137 IPR034288 GO:0005507
Aed1g2416 558 Pfam Multicopper oxidase 428 541 IPR011706 GO:0005507|GO:0016491
Aed1g2416 558 ProSitePatterns Multicopper oxidases signature 2. 521 532 IPR002355 GO:0005507
Aed1g2416 558 Gene3D - 148 335 IPR008972 -
Aed1g2416 558 SUPERFAMILY Cupredoxins 145 332 IPR008972 -
Aed1g2416 558 SUPERFAMILY Cupredoxins 368 558 IPR008972 -
Aed1g2416 558 TIGRFAM laccase: laccase 24 558 IPR017761 GO:0046274|GO:0048046|GO:0052716
Aed1g2416 558 ProSitePatterns Multicopper oxidases signature 1. 516 536 IPR033138 -
Aed1g2416 558 CDD CuRO_2_LCC_plant 152 299 IPR034285 -
Aed1g2416 558 Pfam Multicopper oxidase 152 302 IPR001117 -
Aed1g2416 558 Pfam Multicopper oxidase 25 139 IPR011707 GO:0005507
Aed1g2416 558 PANTHER LACCASE-15 21 558 - -
Aed1g2416 558 Gene3D - 364 558 IPR008972 -
Aed1g2416 558 SUPERFAMILY Cupredoxins 24 161 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2416 Aed-Chr1 20076519 20081259 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2416 K05909 K19791 gmx:100788301 1023.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0806 7 6117054 6123944 Aed1g2416 1 20076519 20081259 PCT