Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0681 ATGGAAATCCTAAACAAAGCCTCAGTCCTCTTGTTCCTTTCCCTCTTATTAATCAACCATTCCCACGCTGGAGGCATTGCAGTGTACTGGGGCCAAAACGGAGGAGAAGGCACCTTAGCAGAAGCATGCAACACCGGAAACTACCAATATGTGAACATAGCCTTCTTGTCCACTTTTGGCAACGGCCAAACCCCACAACTTAACCTTGCAGGCCATTGCGACCCCAACAACGGTGGCTGCACCGGCTTGAGCAGTGACATCCAAACTTGCCAAGACCTTGGCATCAAAGTGTTTCTCTCCCTTGGAGGCGGCGCCGGAGGCTACTCCCTCAACTTGCCCGATGATGCCACACAACTTGCAAACTACCTCTGGGAAAATTTCCTTGGAGGCCAAACTGGATCAGGGCCATTAGGTAATGTTATCTTGGATGGCATTGACTTTGACATTGAGTCTGGAGGGAGTGACCATTATGATGACCTAGCAAGGGCACTCCACAGCTTAAGTACTTCGCAAAGGAAGGTGTACTTGTCAGCAGCACCACAGTGCATAATCCCTGATGCACACTTGGATGGTGCAATCCAAACAGGGCTCTTTGACTATGTGTGGGTTCAGTTCTACAACAACCCTTCATGCCAATACTCCAGTGGAAACACCAACGATTTGATCAATTCATGGAGCCAGTGGACCAGTACAGTGCCTGCTTCTCAAGTCTTCATGGGGCTTCCTGCTTCTGAAGCTGCTGCTCCAAGTGGTGGCTTTGTTCCTTCTGATGTGTTAACCTCTCAGATTCTTCCTCTGATTCAGCAGTCTTCAAACTATGGTGGTGTCATGTTATGGGATAGATTCAATGATGTCCAAACTGGTTACAGTGATGCTATTATTGGAAGTGTTTAA 894 0.481 MEILNKASVLLFLSLLLINHSHAGGIAVYWGQNGGEGTLAEACNTGNYQYVNIAFLSTFGNGQTPQLNLAGHCDPNNGGCTGLSSDIQTCQDLGIKVFLSLGGGAGGYSLNLPDDATQLANYLWENFLGGQTGSGPLGNVILDGIDFDIESGGSDHYDDLARALHSLSTSQRKVYLSAAPQCIIPDAHLDGAIQTGLFDYVWVQFYNNPSCQYSSGNTNDLINSWSQWTSTVPASQVFMGLPASEAAAPSGGFVPSDVLTSQILPLIQQSSNYGGVMLWDRFNDVQTGYSDAIIGSV 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0681 297 Pfam Glycosyl hydrolases family 18 26 284 IPR001223 GO:0005975
Aed7g0681 297 PANTHER ACIDIC ENDOCHITINASE 9 297 - -
Aed7g0681 297 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 142 150 IPR001579 GO:0004553|GO:0005975
Aed7g0681 297 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 24 297 IPR001223 GO:0005975
Aed7g0681 297 SUPERFAMILY (Trans)glycosidases 21 292 IPR017853 -
Aed7g0681 297 Gene3D Glycosidases 24 294 - -
Aed7g0681 297 PANTHER ENDOCHITINASE 9 297 - -
Aed7g0681 297 CDD GH18_hevamine_XipI_class_III 24 295 IPR045321 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0681 Aed-Chr7 5054364 5055757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed7g0681 10 297 Glycoside Hydrolase AT5G24090 56.897 1.27e-120 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0681 K01183 - gmx:547454 530.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0681 7 5054364 5055757 Aed1g2330 1 19322818 19323738 PCT