Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0610 ATGATCCTTGCTCCTCCTCCAACACTTGTCCTTGGTTCAATAGCCTTTGCAATCTTTTGGGTTCTAGCAGTATTCCCATGTGTGCCTTTTCTACCCATTGGGAGAACTGCAGGGTCCCTACTAGGGGCAATGCTTATGGTCATATTCAAAGTTCTTAGTCCAGACCAAGCTTTTGGTGCAATTGATCTCCCAATTCTTGGTCTTCTTTTTGGGACAATGGTTGTCACAGTTTTTCTTGAAAGAGCAGACATGTTCAAGTACTTGGGGAAATTACTCTCTTGGAAAAGTAGAGGACCAAAGGACTTGCTTTGTAGAATCTGTCTCATTTCTGCCATCTCAAGTGCTTTTTTCACCAATGACACATCTTGTGTTGTGTTGACTGAATTTGTGTTGAAAATTGCAAGGCAGCATAACCTCCCACCTTACCCTTTCCTACTTGCCCTTGCTTCAAGTGCTAATATTGGATCCTCAGCAACTCCAATAGGGAACCCCCAGAATCTAGTTATAGCTATTCAAGGTAAAATATCATTTGGGAGTTTTCTCACTGGTATTCTACCAGCTATGCTTGTAGGAGTTGTGGTGAATGTTGTATTTCTTATAGCCATGTATTGGAATGTGTTGACTATTCATAAGGATGAAGAGGATCCAATTTCAGAAGTTGCAGAAGAGGAGGTTATTTGCCATCAGTTTTCTCCTGCCACAATGTCACATTGTGCATCCTTTAATTCTCATGAATGCAATGAAAATCTAGAACCTACTAATGATCTTCAAAACCTTTCTCAAGTTCATGCTATCAGAAACCAAACAAACACAAATGTAAGTGAAGCTATGATGGTTCTTAGTAGCACAAAGGATTCCACAACAAACACAACAAATGATGCAAAGGAGGAAACTAATCCTTCAAAAAGTGTTGCAATAGTAGTAGATAAACCTATAGAAGCACATGTTAAGCCCTCTTCACAAGGAAAGATGGAGTACTATTTGAGCATGAAATGGAAGAGGATAGTGTGGAAATCTAGTGTTTATGCAATCACATTGGTGATGCTGATTGCAATGCTTCTTGGTGTAAATATGGCATGGGCTGCAATTGCAGCTGCAATAACTTTGGTGGTTCTTGATTTCAAAGATGCAGGGCCAAGCATAGACAAGGTCTCTTATTCACTTTTGATATTCTTCTGTGGAATGTTTATCACAGTAGATGGCTTCAAGAAAACTGGAATTCCAGGTGCTCTTTGGGACATAATGGAGCCTTATTCTCGAATAGATCATGCTAGTGGAATAGCTATACTTGCTATAGTTATACTTGTCCTTTCAAATTTGGCTTCAAATGTACCAACTGTTCTATTGCTTGGAGCAAGAGTTGCTGCCTCAGCTGCTGCAATTTCCAAAGAAGATGAGAAGAGGGCATGGTTGATCTTGGCTTGGGTGAGCACCATAGCAGGGAACTTTTCACTATTAGGATCAGCAGCAAACTTGGTAGTGTGTGAACAAGCTCGTAGGGCTCCAAACATTGGATACACATTAACCTTTTGGACACACCTAAAATTTGGCCTTCCCTCCACTCTTATAGTCACTGCTATTGGGTTGACACTCATAAAATGA 1602 0.4039 MILAPPPTLVLGSIAFAIFWVLAVFPCVPFLPIGRTAGSLLGAMLMVIFKVLSPDQAFGAIDLPILGLLFGTMVVTVFLERADMFKYLGKLLSWKSRGPKDLLCRICLISAISSAFFTNDTSCVVLTEFVLKIARQHNLPPYPFLLALASSANIGSSATPIGNPQNLVIAIQGKISFGSFLTGILPAMLVGVVVNVVFLIAMYWNVLTIHKDEEDPISEVAEEEVICHQFSPATMSHCASFNSHECNENLEPTNDLQNLSQVHAIRNQTNTNVSEAMMVLSSTKDSTTNTTNDAKEETNPSKSVAIVVDKPIEAHVKPSSQGKMEYYLSMKWKRIVWKSSVYAITLVMLIAMLLGVNMAWAAIAAAITLVVLDFKDAGPSIDKVSYSLLIFFCGMFITVDGFKKTGIPGALWDIMEPYSRIDHASGIAILAIVILVLSNLASNVPTVLLLGARVAASAAAISKEDEKRAWLILAWVSTIAGNFSLLGSAANLVVCEQARRAPNIGYTLTFWTHLKFGLPSTLIVTAIGLTLIK 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0610 533 Pfam Citrate transporter 28 480 IPR004680 GO:0016021|GO:0055085
Aed7g0610 533 CDD YbiR_permease 28 532 - -
Aed7g0610 533 PANTHER TRANSPORTER ARSB-RELATED 1 533 - -
Aed7g0610 533 PANTHER TRANSPORTER ARSB-RELATED 1 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0610 Aed-Chr7 4515843 4520199 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0610 - - gmx:100792256 899.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2288 1 19014667 19018689 Aed7g0610 7 4515843 4520199 ECH
Aed7g0610 7 4515843 4520199 Aed7g0610 7 4515843 4520199 ECH
Aed7g0610 7 4515843 4520199 Aed1g2288 1 19014667 19018689 PCT