Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed7g0590 ATGCCTTGCTCTTCCTTCGCTTCCACCACCACTGGCGATAACAGCAGCAACACGAAGAAGAAAGATGGTTCTTCTCTCCACGACTTCAAGCTGAACGAATCTACCTTCTTAGCTTCGCTCATGCCTAAGAAAGAGATTGGCGTCGATCGCTTCCTCGACGCTCATTCCGAATATGACGGTCGCGGCGCTCTCATCGCTATCTTCGATTCTGGTGTAGACCCAGCTGCTGATGGGTTACAGGTTACTTCAGATGGGAAACCAAAAGTTCTCGATGTCATTGATTGCACAGGGAGTGGTGATATTGATACCTCAAAAGTGGTGAAGACCGATTCAGATGGTCTTATTTCTGGGGCATCAGGGGCATCATTGGTTATCAATACTTCATGGAAAAATCCTTCCGGTGAATGGCGTGTGGGTTATAAATTAGTTTATGAGCTATTCACGGAAGATGTGATTTCTCGTTTGAAGGTGAAAGAAAGAAAGAAAAAGTGGGATGAGAAAAACCAGGGGGAAATTGCTAGGGCTGTAAAACAACTTGCTGACTTTGATCAGCAACACATCAAGGTTGAGGATGTAAAACTTAAAACGGCCCGGGAAGATCTCCAGAATAGACTCGATATTCTGAGAAGGCAGTCCGAGAGCTATGATGATAAAGGGCCTGTCATAGATGCTGTTGTCTGGCATGATGGAGAGGTCTGGAGGGTTGCCCTTGACACACAGAGTCTGGAGGATGATCCAAATTGTGGGAAGCTTGCGAGTTTTATGCCTTTAACTAATTATAGGATTGAGAGGAAGCATGGTGTCTTCAGCAAATTAGATGCTTGTACATTTGTTGTTAATGTCTATAATGACGGGAATGTCTTAAGTATTGTAACAGACTGTTCTGCGCATGCCACTCATGTTGCTGGTATAGCTACTGCTTTCCATCCAAAGGAGCCCTTGATGAATGGAGTTGCACCTGGCGCACAAATAATATCTTGTAAAATTGGGGATTCTCGCTTAGGTTCAATGGAAACAGGAACTGGTTTGACTCGGGCACTGATAGCAGCTGTGGAGCATAAGTGTGACCTTATCAACATGAGTTATGGCGAAGCAACATTACTGCCAGATTATGGACGCTTTGTTGATCTTGTGAATGAGGTGGTGAACAAGCATCGTCTAATATTTGTTAGCAGTGCTGGTAATAATGGGCCAGGATTGAGCACCGTTGGTGCACCTGGTGGTACATCTTCAAGTATCATAGGTGTTGGCGCATATGTATCTCCTGCTATGGCTGCTGGTGCTCATTGTGTTGTTGAACCTCCATCTGAGGGGCTTGAATACACTTGGTCTAGCCGAGGACCAACAGCTGATGGAGACCTTGGTGTTTCTGTGAGTGCTCCTGGTGGTGCTGTTGCTCCTGTTCCCACATGGACCCTTCAACGGCGTATGCTCATGAATGGGACATCAATGTCATCACCATCAGCCTGTGGAGGAACTGCATTGCTCATAAGTGCAATGAAGGCCGAGGGAATCCCAGTGAGTCCATACATTGTGAGGAAGGCTCTTGAAAATACCGCAATTCCCATAGGTGGTTTACCTGAGGATAAATTATCCACTGGACAAGGGCTTATGCAAGTTGACAAGGCTTTTGAATATATACAAAAGTGTCAAAATGTTCCATGTGTTTGGTATCAAATAAAAATCCAGCAATGCGGAAAAACAAGTCCTTCATCAAGGGGCATCTATCTTAGGGAGGCCAGTGCTTGCCAACAATCTACCGAGTGGACAGTGCAAGTTAATCCAAAATTTCATGAAGACGCTGACAACTTTGAGGATTTGGTTCCATTTGAGGAGTGCATTGAATTACATTCTACAGAAGAGACAGTTGTGAAGGCCCCTGACTATCTATTGCTCACTCATAATGGTCGAACCTTCAAAATTCCAATCACCATAACAAAGCCCAAGGCCGTAATTAACCAGCCTCCACAAATTTCATTTTCAAAGATGTTATTCCAGCCAGGCCATATAGAAAGGAGATACATAGAAGTGCCGCATGGTGCATCTTGGGCTGAAGTAACGATGAAAACATCAGGTTTTGACACAGCACGAAGATTTTATGTGGATGCTATTCAGCTGTGCCCACTGCAAAGACCTTTGAAATGGGAGACTTCAGTAAACTTTCCTTCCCCTGCTTCCAAAAGCTTTGCCTTTAAGGTAGTAAGCGGTCAGACATTGGAACTTGTCATTTCTCAGTTTTGGTCAAGTGGCATAGGGAGTCATGAGACTGCGAGTGTGGATTTTGAGGTCGTGTTTCACGGGATTAAAGTCAATCAAGAAGAAGTTATACTTGATGGTAGTGACGCACCAGTCAGGATTGATGCTGAAACTCTACTGGCATCTGAGGATCTTGCACCTGTGGCAATTCTAAACAAGATTAGGGTCTCATATCGACCAATAGATTCTAAGATTATTGCACTTTCAACAGATCGTGACAAACTTCCTTCTGGAAAGCAGATACTGGCACTGACTTTGACCTACAAGATCAAATTGGAAGATGGAGCTCAAATAAAACCTCACATACCTTTGCTAAATGACCGGATATATGACACTAAATTTGAGTCTCAATTTTATATGATTTCTGACTCGAATAAGCGCGTATATTCAAGTGGAGATGCCTATCCAAGCTCTTCTAATCTTCCCAAAGGAGAATATATTTTACACTTATATTTGAGGCATGACAATGTGCAGATTTTGGAAAAGATGAGGCATTTGGTGTTATTCATTGAGCGAAATTTGGAAGACAAGGATGTTATTCGGTTAAGCTTTTTCTCTCAACCTGATGGCCCACTGATAGGAAATGGTTCCTTTAAGTCCTCATCACTAGTTCCAGGTATAAAAGAGGGATTATATCTTGGTCCACCACCAAAAGAAAAGCTTCCCAAGAATCCTCCACAAGGATCTGTTTTGCTAGGGGCAATTTCATATGGGAAGCTATCATTTGCTGGTCAGGAAGAGAATAAAAATCCTGAAAAGCACCCTGCATCATATCAGATTTCTTATATAGTTCCCCCAAATAAGGTCACTCTCTGCCTTATGAAGTTACCTGCCTTCACATCTTGTATGCTTTACAAAATTGATGAGGACAAGGGAAAAGGTTCTACGTTATCTTCCAAGAAGAATGTTTCAGAACGTTTAAAAGAAGAGGTAAGAGATGCAAAAATAAAAGTTCTATCAAGCCTAAAACAAGACACTGATGAAGAGCGCTTGGAGTGGAAAGAGCTATCTGCCTTGCTTAAATCAGAATATCCAAAGTACACTCCATTACTTGCAACGATTTTGGAAGGTTTAGTTTCTAGGAGTAATGTCAAAGACAAAATCCACCATGATGAAGAGGTAGTTGGTGCCGCCAATGAGGTGATTAACAGTATTGACAGAGAAGAGCTAGCAAAATTTTTTGCACTAAAAAATGATCCAGAAGATGATGAAGCAGAGAATATCAGGAAAAAGATGGAGTTAACCCGAGACCAATTAGCAGGTGCACTGTACCAAAAGGGGCTTGCGCTGGCAGAGATTGAGTCTTTAAAGTTGGCAGACTTGACTTGGTGTATATTGTCAAAGGACGGAGATAAGTCCCCGACTTTGGATGCCACAGAAGGGGCAAAAGAAGACATGGACAATAAAAAATCTACGGATGGTCGCAGTCAAGGAGATTTGTTTGAAGAGAATTTTAAAGAACTGAGGAAATGGGTTAACGTGAAGTCAACTAAATATGGAATCCTCTTAGTAACACGTGAGAGGCGAGCTCAAAGGCTTGGGACAGCATTGAAGGTACTGTGTGACATAATTCAAGATGATGCAGAGCCCGCTAAGAAGAAATTCTATGAACTTAAGCTCTCTTTGCTTGATGAGATTGGATGGACACATTTAGCTGCATATGAGAAACAGTGGATGCATGTGCGCTTCCCTTCAAGCTTGCCTCTTTTCTAG 3969 0.4273 MPCSSFASTTTGDNSSNTKKKDGSSLHDFKLNESTFLASLMPKKEIGVDRFLDAHSEYDGRGALIAIFDSGVDPAADGLQVTSDGKPKVLDVIDCTGSGDIDTSKVVKTDSDGLISGASGASLVINTSWKNPSGEWRVGYKLVYELFTEDVISRLKVKERKKKWDEKNQGEIARAVKQLADFDQQHIKVEDVKLKTAREDLQNRLDILRRQSESYDDKGPVIDAVVWHDGEVWRVALDTQSLEDDPNCGKLASFMPLTNYRIERKHGVFSKLDACTFVVNVYNDGNVLSIVTDCSAHATHVAGIATAFHPKEPLMNGVAPGAQIISCKIGDSRLGSMETGTGLTRALIAAVEHKCDLINMSYGEATLLPDYGRFVDLVNEVVNKHRLIFVSSAGNNGPGLSTVGAPGGTSSSIIGVGAYVSPAMAAGAHCVVEPPSEGLEYTWSSRGPTADGDLGVSVSAPGGAVAPVPTWTLQRRMLMNGTSMSSPSACGGTALLISAMKAEGIPVSPYIVRKALENTAIPIGGLPEDKLSTGQGLMQVDKAFEYIQKCQNVPCVWYQIKIQQCGKTSPSSRGIYLREASACQQSTEWTVQVNPKFHEDADNFEDLVPFEECIELHSTEETVVKAPDYLLLTHNGRTFKIPITITKPKAVINQPPQISFSKMLFQPGHIERRYIEVPHGASWAEVTMKTSGFDTARRFYVDAIQLCPLQRPLKWETSVNFPSPASKSFAFKVVSGQTLELVISQFWSSGIGSHETASVDFEVVFHGIKVNQEEVILDGSDAPVRIDAETLLASEDLAPVAILNKIRVSYRPIDSKIIALSTDRDKLPSGKQILALTLTYKIKLEDGAQIKPHIPLLNDRIYDTKFESQFYMISDSNKRVYSSGDAYPSSSNLPKGEYILHLYLRHDNVQILEKMRHLVLFIERNLEDKDVIRLSFFSQPDGPLIGNGSFKSSSLVPGIKEGLYLGPPPKEKLPKNPPQGSVLLGAISYGKLSFAGQEENKNPEKHPASYQISYIVPPNKVTLCLMKLPAFTSCMLYKIDEDKGKGSTLSSKKNVSERLKEEVRDAKIKVLSSLKQDTDEERLEWKELSALLKSEYPKYTPLLATILEGLVSRSNVKDKIHHDEEVVGAANEVINSIDREELAKFFALKNDPEDDEAENIRKKMELTRDQLAGALYQKGLALAEIESLKLADLTWCILSKDGDKSPTLDATEGAKEDMDNKKSTDGRSQGDLFEENFKELRKWVNVKSTKYGILLVTRERRAQRLGTALKVLCDIIQDDAEPAKKKFYELKLSLLDEIGWTHLAAYEKQWMHVRFPSSLPLF 1322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed7g0590 1322 Pfam Tripeptidyl peptidase II 792 976 IPR022229 -
Aed7g0590 1322 PRINTS Subtilisin serine protease family (S8) signature 480 496 IPR015500 -
Aed7g0590 1322 PRINTS Subtilisin serine protease family (S8) signature 60 79 IPR015500 -
Aed7g0590 1322 PRINTS Subtilisin serine protease family (S8) signature 293 306 IPR015500 -
Aed7g0590 1322 PANTHER PEPTIDASE S8 12 641 - -
Aed7g0590 1322 Gene3D - 1053 1322 - -
Aed7g0590 1322 Gene3D - 558 653 - -
Aed7g0590 1322 PANTHER TRIPEPTIDYL PEPTIDASE II 639 1204 - -
Aed7g0590 1322 PANTHER TRIPEPTIDYL PEPTIDASE II 12 641 - -
Aed7g0590 1322 MobiDBLite consensus disorder prediction 1 24 - -
Aed7g0590 1322 MobiDBLite consensus disorder prediction 1 19 - -
Aed7g0590 1322 ProSitePatterns Serine proteases, subtilase family, serine active site. 481 491 IPR023828 -
Aed7g0590 1322 SUPERFAMILY Subtilisin-like 40 554 IPR036852 GO:0004252|GO:0006508
Aed7g0590 1322 Gene3D Peptidase S8/S53 domain 43 133 IPR036852 GO:0004252|GO:0006508
Aed7g0590 1322 Gene3D Peptidase S8/S53 domain 221 555 IPR036852 GO:0004252|GO:0006508
Aed7g0590 1322 ProSiteProfiles Serine proteases, subtilase domain profile. 45 544 - -
Aed7g0590 1322 Coils Coil 191 218 - -
Aed7g0590 1322 Coils Coil 1049 1069 - -
Aed7g0590 1322 PANTHER PEPTIDASE S8 639 1204 - -
Aed7g0590 1322 CDD Peptidases_S8_Tripeptidyl_Aminopeptidase_II 40 523 IPR034051 GO:0006508|GO:0008240
Aed7g0590 1322 Gene3D - 159 217 - -
Aed7g0590 1322 MobiDBLite consensus disorder prediction 1207 1228 - -
Aed7g0590 1322 Pfam Subtilase family 60 520 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed7g0590 Aed-Chr7 4333338 4353233 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed7g0590 K01280 - gmx:100798235 2370.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g0590 7 4333338 4353233 Aed7g0590 7 4333338 4353233 ECH
Aed7g0590 7 4333338 4353233 Aed1g2272 1 18854812 18881651 PCT