Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g2272 ATGCATAACCAACACACACTCTTACTCAGACTCCCCACACTGCCCTCTCACTCTCTTCTCACCATCCGTCACCCCACACCAAAGACAAAACTCAACAGCAAGAGAAGGAAACACACTTCCTCCTTCAGAAGAAGTAATTGGATTGTCCCCAAAGCATTGTCAATGCCTCTCTGTGGTGGTGCTGGCAACGACAACAGCAACAACGGTGCCTCTCCTCGCAACTCGAAGCTGAACGAGTCAACCTTCCTGGCTTCTCTCATGCCCAAGACGGAGATTGGCGCCGACCGCTTCCTCCATTCTCACCCACACTACGATGGTCGCGGTGCTCTCATCGCTATCTTCGATTCTGGGGTAGACCCGGCTGCTGCTGGATTAAAGGTTACCTCAGATGGGGAACCAAAAATTATTGATATTCTTGATTGCACTGGGAGTGGAGATATTGATACCTCAAAGGTGGTGAAGGCTGATGCCGATGGTTGTATTTCTGGGGCTTCAGGGGCATCTTTGGTTATCAATACTTCATGGAAAAATCCATCTGGTGACTGGCATGTGGGTTATAAATTGGTTTATGAGCTCTTTACAGAAAATTTGACTTCTCGTTTGAAGGTAGCATTAAACTTTTTTTTAAAAATATTATAG 639 0.4648 MHNQHTLLLRLPTLPSHSLLTIRHPTPKTKLNSKRRKHTSSFRRSNWIVPKALSMPLCGGAGNDNSNNGASPRNSKLNESTFLASLMPKTEIGADRFLHSHPHYDGRGALIAIFDSGVDPAAAGLKVTSDGEPKIIDILDCTGSGDIDTSKVVKADADGCISGASGASLVINTSWKNPSGDWHVGYKLVYELFTENLTSRLKVALNFFLKIL 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g2272 212 Gene3D Peptidase S8/S53 domain 89 184 IPR036852 GO:0004252|GO:0006508
Aed1g2272 212 SUPERFAMILY Subtilisin-like 92 176 IPR036852 GO:0004252|GO:0006508
Aed1g2272 212 PANTHER TRIPEPTIDYL PEPTIDASE II 59 206 - -
Aed1g2272 212 PANTHER PEPTIDASE S8 59 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g2272 Aed-Chr1 18854812 18881651 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g2272 K01280 - gmx:100787184 340.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g2272 1 18854812 18881651 Aed1g2272 1 18854812 18881651 ECH
Aed7g0590 7 4333338 4353233 Aed1g2272 1 18854812 18881651 PCT