Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2397 ATGTTCAGTCCAAGCATGGATTCTACAAGGGATGTGAGTGGTGTGGCAGGGACTGTGCTAATTCCCATGCGGTTTGTGTGGCCATACGGGGGAAGAAGTGTGTATCTAAGTGGTTCTTTCACACGGTGGTCTGAACTTCTACAAATGTCACCAGTGGAAGGCTGCCCAACTGTGTTTCAAGTCATTCATAGCTTGCCCCCTGGTCATCATCAGTACAAGTTTTTTGTTGATGGAGAATGGCGGCATGATGACCATCAACCTTATGTATCTGGAGAATATGGGATAGTTAACACTGTTTTATTGGCTAATGATCCTAATATTGTACCTGTTTTAACTCCAGACATAGTTTCTGGATCTAACATGGATGTGGACAATGAGGCTTTTCGACGCATGGTTCGATTGACAGATGGTACATTAAGTAATGTGTTATTGCCAAGAATATCAGATGTCGATATACAGACCTCTCGTCAGCGTATTTCTGCATTCCTATCTATGTGCACAGCATATGAATTACTTCCCGAGTCAGGCAAGGTTGTTACCTTGGATGTTGATCTGCCTGTGAAACAGGCATTTCACATACTGCATGAGCAGGGAATCCCCATTGCTCCTCTTTGGGACATCTGCAAGGGGCAGTTTGTTGGAGTTCTTAGTGCCTTGGATTTTATTTTAATTTTAAGAGAGCTCGGAAATCATGGGTCCAATCTAACAGAAGAGGAGCTTGAAACACATACCATATCAGCTTGGAAAGGAGGAAAATGGACAGGACTTACACAATGTTTTATCCGTGCAGGGCCATATGATAATTTGAAAGAAATTGCTGTGAGGATCCTGCAAAATGGAATTTCAACAGTTCCAATTATTCATTCAGAGGATGGTTCATTTCCACAGCTACTACATCTTGCCTCACTTTCAGGAATCCTTAAATGCATTTGCAGGTATTTTAGGAATTGTACCAGTTCATTGCCTATACTTCAACTTCCAATTTGTGCAATCCCTGTGGGCACATGGGTGCCCAAAATTGGGGAGTCAAATTGCCGGCCACTAGCAATGTTGAGACCAAATGCTTCACTTACTTCAGCCCTAAACTTATTAGTTCAAGCTCAAGTAAGTTCAATACCAATAGTTGATGATAGTGACTCATTACTGGATATATATTGTCGAAGTGATATAACAGCTTTGGCAAAGGACAGAACTTATACACATATTAATCTTGATGAAATGACTGCATTGCAATTGGGCCAGGATTCTTGCAATCCTTATGAGCTGAGAAGTCAAAGATGTCAGATGTGTTTGCGAACTGATTCTCTGCATAAAGTGATGGAACGTTTGGCAAATCCAGGTGTGAGACGGCTTGTTATTGTGGAAGCTGGCAGCAAGCGTGTAGAAGGCATCATAGCACTGAGTGACATATTCAACTTCTTCTTTGGTTATGACAGTTAG 1440 0.4181 MFSPSMDSTRDVSGVAGTVLIPMRFVWPYGGRSVYLSGSFTRWSELLQMSPVEGCPTVFQVIHSLPPGHHQYKFFVDGEWRHDDHQPYVSGEYGIVNTVLLANDPNIVPVLTPDIVSGSNMDVDNEAFRRMVRLTDGTLSNVLLPRISDVDIQTSRQRISAFLSMCTAYELLPESGKVVTLDVDLPVKQAFHILHEQGIPIAPLWDICKGQFVGVLSALDFILILRELGNHGSNLTEEELETHTISAWKGGKWTGLTQCFIRAGPYDNLKEIAVRILQNGISTVPIIHSEDGSFPQLLHLASLSGILKCICRYFRNCTSSLPILQLPICAIPVGTWVPKIGESNCRPLAMLRPNASLTSALNLLVQAQVSSIPIVDDSDSLLDIYCRSDITALAKDRTYTHINLDEMTALQLGQDSCNPYELRSQRCQMCLRTDSLHKVMERLANPGVRRLVIVEAGSKRVEGIIALSDIFNFFFGYDS 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2397 479 SUPERFAMILY E set domains 21 103 IPR014756 -
Aed6g2397 479 CDD E_set_AMPKbeta_like_N 22 100 - -
Aed6g2397 479 ProSiteProfiles CBS domain profile. 344 400 IPR000644 -
Aed6g2397 479 Pfam Glycogen recognition site of AMP-activated protein kinase 21 104 IPR032640 -
Aed6g2397 479 SUPERFAMILY CBS-domain pair 157 316 IPR046342 -
Aed6g2397 479 ProSiteProfiles CBS domain profile. 171 233 IPR000644 -
Aed6g2397 479 PANTHER CBS DOMAIN, IMMUNOGLOBULIN E-SET-RELATED 11 479 - -
Aed6g2397 479 SUPERFAMILY CBS-domain pair 345 475 IPR046342 -
Aed6g2397 479 Gene3D - 148 319 IPR046342 -
Aed6g2397 479 SMART cbs_1 426 475 IPR000644 -
Aed6g2397 479 SMART cbs_1 347 395 IPR000644 -
Aed6g2397 479 SMART cbs_1 177 226 IPR000644 -
Aed6g2397 479 Gene3D Immunoglobulins 18 101 IPR013783 -
Aed6g2397 479 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 11 479 - -
Aed6g2397 479 Pfam CBS domain 346 391 IPR000644 -
Aed6g2397 479 Pfam CBS domain 429 474 IPR000644 -
Aed6g2397 479 Gene3D - 327 478 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2397 Aed-Chr6 25603321 25610516 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2397 - - gmx:100810976 909.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2397 6 25603321 25610516 Aed6g2397 6 25603321 25610516 ECH
Aed6g2397 6 25603321 25610516 Aed4g0736 4 6145531 6152946 PCT