Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0736 ATGTTTGGTCAGAGCATGGATTCTGTAAGGGATGCGGGTGGTGTGGCAGGGACAGTGCTAATTCCCATGCGTTTTGTGTGGCCATATGGAGGAAGGAGTGTGTTTCTCAGTGGTTCTTTCACACGGTGGTCTGAGCTTCTACCGATGTCGCCAGTGGAAGGTTGTCCAACTGTGTTTCAAGTTATTTATAACTTGCCACCTGGTTACCATCAGTACAAGTTTTTTGTTGATGGAGAATGGCGGCATGATGAACATCAACCTTATGTACCTGGAGAATATGGGATAGTCAACACTGTCTTCTTGGCCACTGATCCTAATTACATGCCTGTTTTACCTCCAGATGTTACTTCTGGAAATAGCATGGATGTGGATAATGACTTTCGCCGAATGGTCCGGTTGACCGATGGTACATTGGGTGAGGTGCTGCCAAGAATATCAGATACCGATTTACAGATTTCCCGTCAACGTATTTCTGCATTTCTATCTTCACACACTGCTTATGAATTACTTCCCGAGTCAGGCAAGGTTGTCGCTTTGGATGTTGATCTACCAGTGAAACAGGCATTTCACATACTGCATGAGCAGGGAATTTTCATGGCTCCTCTTTGGGACTTCTGCAAGGGGCAATTTGTTGGTGTTCTTAGTGCTTTGGATTTTATTTTAATTTTAAGAGAGCTGGGGAATCATGGGTCCAATCTGACAGAAGAGGAGCTTGAAACACATACCATATCAGCTTGGAAAGAAGGAAAGTCGTACCTAAATAGACAGAACAATGGACATGGAACTGCATTTTCAAGACGTTTTATCTATGCAGGACCATATGATAATCTGAAAGATATTGCCATGAAGATCTTGCAAAAGGAGGTTTCAACAGTTCCTATTATCCATTCTTCTTCTGAAGATGCTTCATTTCCACAGTTACTACACCTTGCTTCACTTTCAGGAATACTTAAATGCATTTGTAGGTATTTTAGGCACTGCTCTAGTACCTTGCCTATACTTCAACTTCCAATCTGTGCAATACCTGTGGGCACGTGGGTGCCCAAAATTGGGGAATCAAATCGGCGGCCTCTAGCAATGTTGAGACCAACCGCTTCTCTTGCTTCAGCACTAAATTTATTAGTTCAAGCCCAAGTAAGCTCAATACCAATAGTTGATGATAATGACTCGTTACTGGATATATATTGTCGGAGTGACATAACAGCTTTGGCAAAGAACAGAGCATATACACATATTAATCTTGATGAAATGACTGCTTTGCAGTTGGGCCAGGACGCATATAGTCCCCATGAGCTTAGAAGTCAAAGATGTCAGATGTGTTTGCGTTCTGATTCTCTGCATAAAGTGATGGAACGTTTGGCAAATCCAGGTGCTAGGCGGCTTGTCATCGTGGAAGCTGGCAGCAAACGCGTAGAAGGCATTGTTTCATTGAGTGACATATTGAAGTTCTTCCTTGGTGGTTAG 1464 0.4296 MFGQSMDSVRDAGGVAGTVLIPMRFVWPYGGRSVFLSGSFTRWSELLPMSPVEGCPTVFQVIYNLPPGYHQYKFFVDGEWRHDEHQPYVPGEYGIVNTVFLATDPNYMPVLPPDVTSGNSMDVDNDFRRMVRLTDGTLGEVLPRISDTDLQISRQRISAFLSSHTAYELLPESGKVVALDVDLPVKQAFHILHEQGIFMAPLWDFCKGQFVGVLSALDFILILRELGNHGSNLTEEELETHTISAWKEGKSYLNRQNNGHGTAFSRRFIYAGPYDNLKDIAMKILQKEVSTVPIIHSSSEDASFPQLLHLASLSGILKCICRYFRHCSSTLPILQLPICAIPVGTWVPKIGESNRRPLAMLRPTASLASALNLLVQAQVSSIPIVDDNDSLLDIYCRSDITALAKNRAYTHINLDEMTALQLGQDAYSPHELRSQRCQMCLRSDSLHKVMERLANPGARRLVIVEAGSKRVEGIVSLSDILKFFLGG 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0736 487 Pfam Glycogen recognition site of AMP-activated protein kinase 21 101 IPR032640 -
Aed4g0736 487 CDD E_set_AMPKbeta_like_N 22 100 - -
Aed4g0736 487 SUPERFAMILY CBS-domain pair 354 486 IPR046342 -
Aed4g0736 487 SUPERFAMILY E set domains 21 102 IPR014756 -
Aed4g0736 487 SMART cbs_1 357 405 IPR000644 -
Aed4g0736 487 SMART cbs_1 175 224 IPR000644 -
Aed4g0736 487 SMART cbs_1 436 485 IPR000644 -
Aed4g0736 487 Gene3D Immunoglobulins 21 109 IPR013783 -
Aed4g0736 487 PANTHER CBS DOMAIN, IMMUNOGLOBULIN E-SET-RELATED 11 486 - -
Aed4g0736 487 ProSiteProfiles CBS domain profile. 169 231 IPR000644 -
Aed4g0736 487 ProSiteProfiles CBS domain profile. 432 487 IPR000644 -
Aed4g0736 487 ProSiteProfiles CBS domain profile. 353 410 IPR000644 -
Aed4g0736 487 SUPERFAMILY CBS-domain pair 156 326 IPR046342 -
Aed4g0736 487 Gene3D - 345 486 IPR046342 -
Aed4g0736 487 Pfam CBS domain 438 485 IPR000644 -
Aed4g0736 487 Pfam CBS domain 355 401 IPR000644 -
Aed4g0736 487 Gene3D - 146 330 IPR046342 -
Aed4g0736 487 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 11 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0736 Aed-Chr4 6145531 6152946 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0736 - - gmx:100781819 940.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2397 6 25603321 25610516 Aed4g0736 4 6145531 6152946 PCT