Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2390 ATGGAGGAACCGAGCAAGCTGAAGCGTGCCATGATTGATTCCTCGGCCGGGGCTATTTCTGGTGGAATATCACGGACAGTTACCTCGCCCCTCGATGTTATTAAGATTCGATTCCAGGTTCAGCTGGAGCCCACGTCTTCATGGGCTTTACTACGCAAGGATTTGTCTGCATCATCAAAATACACTAGTATGTTTCAAGCATCCAAGGATATTCTTAGAGAGGAAGGCCTACAGGGGTTTTGGCGGGGAAATGTGCCGGCATTGCTCATGGTTATGCCATATACAGCTATACAATTTACAGTGTTGCACAAGTTGAAGACTATTGCCACTGGTTCTTCCAAGACAGAGAATCACATTAATTTGAGCCCTTATCTATCCTACGTCAGCGGGGCATTAGCTGGGTGTGCAGCTACAGTAGGTTCATATCCCTTTGATCTTCTCCGAACCATATTAGCTTCTCAGGGTGAACCAAAGGTATATCCAAACATGAGGTCAGCATTCATGGATATTGTCCATATTCGTGGATTCCAAGGATTGTATTCCGGATTGTCACCAACACTAGTGGAGATTATACCTTATGCAGGCCTACAATTTGGCACATATGATACATTTAAGCGTTGGGCCATGGTTTGGAATCATAGATATTCCAACACTGCTGCAGAAGATAACCTCTCTAGCTTTCACCTTTTCCTTTGTGGGTTGGCAGCTGGAACATGTGCCAAGCTTGTCTGTCATCCACTTGATGTCGTCAAAAAAAGATTTCAGATTGAAGGGCTTCAAAGGCATCCAAGATATGGAGCTCGAGTCGAGCATCATGCATACAGGAATATGTCTGATGCCATGCAACGGATATTGCGATTAGAGGGCTGGGCTGGTTTGTACAAGGGGATAATCCCGTCAACTGTTAAAGCTGCACCTGCTGGTGCTGTCACATTTGTTGCTTATGAATTGGCATCAGATTGGTTAGAGTCTACTTTCAACTGA 984 0.4502 MEEPSKLKRAMIDSSAGAISGGISRTVTSPLDVIKIRFQVQLEPTSSWALLRKDLSASSKYTSMFQASKDILREEGLQGFWRGNVPALLMVMPYTAIQFTVLHKLKTIATGSSKTENHINLSPYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPNMRSAFMDIVHIRGFQGLYSGLSPTLVEIIPYAGLQFGTYDTFKRWAMVWNHRYSNTAAEDNLSSFHLFLCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPRYGARVEHHAYRNMSDAMQRILRLEGWAGLYKGIIPSTVKAAPAGAVTFVAYELASDWLESTFN 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2390 327 ProSiteProfiles Solute carrier (Solcar) repeat profile. 8 108 IPR018108 -
Aed6g2390 327 PANTHER SOLUTE CARRIER FAMILY 25 3 326 - -
Aed6g2390 327 ProSiteProfiles Solute carrier (Solcar) repeat profile. 224 321 IPR018108 -
Aed6g2390 327 Pfam Mitochondrial carrier protein 224 323 IPR018108 -
Aed6g2390 327 Pfam Mitochondrial carrier protein 14 109 IPR018108 -
Aed6g2390 327 Pfam Mitochondrial carrier protein 122 208 IPR018108 -
Aed6g2390 327 Gene3D Mitochondrial carrier domain 5 325 IPR023395 -
Aed6g2390 327 ProSiteProfiles Solute carrier (Solcar) repeat profile. 121 207 IPR018108 -
Aed6g2390 327 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 3 326 - -
Aed6g2390 327 PRINTS Mitochondrial carrier protein signature 26 40 IPR002067 GO:0055085
Aed6g2390 327 PRINTS Mitochondrial carrier protein signature 180 198 IPR002067 GO:0055085
Aed6g2390 327 PRINTS Mitochondrial carrier protein signature 233 255 IPR002067 GO:0055085
Aed6g2390 327 PRINTS Mitochondrial carrier protein signature 13 26 IPR002067 GO:0055085
Aed6g2390 327 PRINTS Mitochondrial carrier protein signature 136 154 IPR002067 GO:0055085
Aed6g2390 327 PRINTS Mitochondrial carrier protein signature 83 103 IPR002067 GO:0055085
Aed6g2390 327 SUPERFAMILY Mitochondrial carrier 9 316 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2390 Aed-Chr6 25545249 25548373 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2390 1 327 Organic Solute Cotransporters AT3G21390 75.000 0.0 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2390 K15108 - gmx:100784986 620.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2390 6 25545249 25548373 Aed6g2390 6 25545249 25548373 ECH
Aed6g2390 6 25545249 25548373 Aed4g0725 4 6055800 6060172 PCT