Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0725 ATGAAGGGGGAAACTAGCCAGCTGAAGCATGCTGCGATTGATGCCTCTGCCGGAGCTATTTCCGGTGGCATATCGAGGACAGTGACGTCACCTCTCGATGTTATTAAGATCAGGTTCCAGGTTCAACTAGAGCCCACATCTACATGGAATTTACTACGCAAGGATTTGTCTACACCTTCAAAGTATACTGGCATGCTTCAAGCAAGCAAAGATATTTTTAGAGAAGAGGGCATACGGGGTTTTTGGCGGGGCAATGTGCCAGCTTTGCTCATGGTTATGCCATATACAGCTATACAATTTACTGTTCTGCACATGTTCAAGACTTTTGCCTCTGGTTCTTCCAAGACAGAGAATCACATTAACTTGAGCCCTTATTTATCCTACATGAGTGGGGCATTAGCTGGGTGTGCTGCCACTGTAGGGTCATATCCCTTTGATCTTCTCAGAACCATATTAGCTTCCCAGGGTGAACCAAAGGAATGGAATCGTCGTCAATATTCAAATCCTACTTTAGAAAGCCTCTCTAGCTTTCAGCTTTTCGTGTGTGGGTTGGCTGCAGGAACATGTGCTAAGCTCGCCTGCCATCCACTTGATGTGGTCAAGAAAAGATTTCAGATTGAAGGTCTTCAAAGACATCCAAGATATGGAGCTCGGGTTGAACATCGTGCATACAAAAATATGCTTGATGGCCTGAAAAGAATATTGCAGATGGAGGGTTGGGCTGGCCTATATAAGGGGATAGCCCCATCAACTATTAAAGCTGCACCAGCTAGTGCTGTAACGTTTGTTGCCTATGAATCGACAGTAGATTGGCTAGAATCTATATTGACTTGA 834 0.4472 MKGETSQLKHAAIDASAGAISGGISRTVTSPLDVIKIRFQVQLEPTSTWNLLRKDLSTPSKYTGMLQASKDIFREEGIRGFWRGNVPALLMVMPYTAIQFTVLHMFKTFASGSSKTENHINLSPYLSYMSGALAGCAATVGSYPFDLLRTILASQGEPKEWNRRQYSNPTLESLSSFQLFVCGLAAGTCAKLACHPLDVVKKRFQIEGLQRHPRYGARVEHRAYKNMLDGLKRILQMEGWAGLYKGIAPSTIKAAPASAVTFVAYESTVDWLESILT 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0725 277 Pfam Mitochondrial carrier protein 14 110 IPR018108 -
Aed4g0725 277 Pfam Mitochondrial carrier protein 174 272 IPR018108 -
Aed4g0725 277 SUPERFAMILY Mitochondrial carrier 9 266 IPR023395 -
Aed4g0725 277 ProSiteProfiles Solute carrier (Solcar) repeat profile. 174 271 IPR018108 -
Aed4g0725 277 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 163 276 - -
Aed4g0725 277 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 4 159 - -
Aed4g0725 277 PANTHER SOLUTE CARRIER FAMILY 25 163 276 - -
Aed4g0725 277 PANTHER SOLUTE CARRIER FAMILY 25 4 159 - -
Aed4g0725 277 Gene3D Mitochondrial carrier domain 12 166 IPR023395 -
Aed4g0725 277 Gene3D Mitochondrial carrier domain 167 275 IPR023395 -
Aed4g0725 277 PRINTS Mitochondrial carrier protein signature 84 104 IPR002067 GO:0055085
Aed4g0725 277 PRINTS Mitochondrial carrier protein signature 27 41 IPR002067 GO:0055085
Aed4g0725 277 PRINTS Mitochondrial carrier protein signature 14 27 IPR002067 GO:0055085
Aed4g0725 277 PRINTS Mitochondrial carrier protein signature 137 155 IPR002067 GO:0055085
Aed4g0725 277 ProSiteProfiles Solute carrier (Solcar) repeat profile. 9 109 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0725 Aed-Chr4 6055800 6060172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g0725 174 277 Organic Solute Cotransporters AT3G21390 77.885 1.36e-53 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0725 K15108 - gmx:100803750 485.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0725 4 6055800 6060172 Aed4g0725 4 6055800 6060172 ECH
Aed6g2390 6 25545249 25548373 Aed4g0725 4 6055800 6060172 PCT