Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2389 ATGGAACAGAGAACGCTAGAGCTGAACCTGGCGTCAGCAAAGGATCTGAAAGACCTGAATCTGTTCTCGAAGATGGATGTATACGCCGTCGTTTCACTCTCTGGCGAGCAAAAGACCAGGACTCCCGTGGACCGAAACGGCGGCACCAACCCCACCTGGAATTTCCCCGTGAAATTCACGTTTGACGAATCTGCGGCGCGACAGAAGCGGTTGAGCCTCGAAATAAAGCTTCGGTGCGAGCGCGCCCTGGCCAGCGATAAGGACATCGGCCAGGTCCACGTCCCTCTCCTGGAGCTCCTTAACCAACCCGGCGACGGAAAATCCTTCCAGCATGTTAGTTATCAGGTCAGAAAGCCCTCCGGCAAGCCCAAGGGAGCCTTCAATTTCTCCTACAAATTTGGTGATAATTTTAATTTTACTGCTCTACCCAAGCCATCAGCGCCGCCACCTACCTCAGCTATTCACAAGGTGGACCCAGTCACGGCTTATCCTGCTCCCGCCGTGGGATCCACTTCCTATGCCGGCGGCATATATCCTCCTCCTCCGCCGCCACAATATGCAACCGGTTATGCGTATCCTCCTCAACCGGTTTACGGATACGCGCCACAACCCGGGTACGGTTACCCTCCTGTTCAAAGACCGGCGAAGAACAATTTCGGAATGGGATTGGGAGCGGGGTTGCTTGGAGGAGCCCTGGGTGGGTTTCTGATTGGGGACATGATTTCTGATTCTGGCGCCGGATTTGATTTTTAA 753 0.5432 MEQRTLELNLASAKDLKDLNLFSKMDVYAVVSLSGEQKTRTPVDRNGGTNPTWNFPVKFTFDESAARQKRLSLEIKLRCERALASDKDIGQVHVPLLELLNQPGDGKSFQHVSYQVRKPSGKPKGAFNFSYKFGDNFNFTALPKPSAPPPTSAIHKVDPVTAYPAPAVGSTSYAGGIYPPPPPPQYATGYAYPPQPVYGYAPQPGYGYPPVQRPAKNNFGMGLGAGLLGGALGGFLIGDMISDSGAGFDF 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2389 250 Gene3D C2 domain 3 134 IPR035892 -
Aed6g2389 250 Pfam C2 domain 5 105 IPR000008 -
Aed6g2389 250 PANTHER OS01G0934100 PROTEIN 1 244 - -
Aed6g2389 250 PANTHER INGRESSION PROTEIN FIC1 1 244 - -
Aed6g2389 250 CDD C2_SRC2_like 5 129 IPR044750 GO:0006952
Aed6g2389 250 ProSiteProfiles C2 domain profile. 1 109 IPR000008 -
Aed6g2389 250 SMART C2_3c 5 108 IPR000008 -
Aed6g2389 250 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 134 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2389 Aed-Chr6 25541860 25542612 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2389 - - gmx:100784458 325.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2389 6 25541860 25542612 Aed6g2389 6 25541860 25542612 ECH
Aed6g2389 6 25541860 25542612 Aed4g0724 4 6047990 6048889 PCT