Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0724 ATGGAATACAGAACCTTAGAACTGAACATCATATCTGCAAAGGGCATAAAAAATGTTAATCTCTTCTCCAAGATGGACGTATTCGCCGTCGTTTCGCTCTCCGGCGACCCTCTCCACCCTCAGGCCGCCACCACGCACGTCCACAAAGACTCCGGCAGCAACCCCACGTGGAACTATCCGGTGAAATTCTCGGTCAACGAGACGCTGGCGAAGGATAACCGCTTGTCCCTCGAGATCAAGCTCGTCTCCGACCGCACCCTCGGCGACACCGTCATCGGCACCGTCCATGTTCCTCTCCGGGAGCTTCTGGACAATCCCGGCGACGACGGATCCTCCCGCCAAGTCAGTTACCAGGTCATGAAGGCCTCAGGGAAATCCAAGGGATCCTTGAATTTCTCCTATAAATTCGGCGAACTCGTTCCCGCACCGGCTCACTCGGCCTCGGCAGCCAAGGCGTCCAAGGCCGGACAAGAGCCGGTCATGGCCTATCCACCGACCGGGGCGGGATCAAGTTCTGCCGCTTCCCACGGGATGCCGCAGCAATATCCTGCCGCAGCAGGATACGGGTATCCGCCCCAGCAGGCTTACGGTGGATACCCACAACAACAGCCAGGTTACGGGTATCCACCGCAACAGCCTGGATATGGGTACCCGCCACAGGCTGGTTACGGATACCCACAACAACAGCCAGGTTATGGGTATCCGCAACAACAGCCTGGATATGGATACCCACAGCAGGCCCAGAAGCCAAAGAAGAACAAATTTGGAATGGGATTGGGAGCTGGATTGCTTGGTGGTGCCTTGGGTGGCATGTTGATCGGAGACATGGTATCCGATGCTGCTGATTATGATGCGGGCTATGATGCTGGCTTTGATGATGCTGGTGGATTTGACTTTTAA 900 0.56 MEYRTLELNIISAKGIKNVNLFSKMDVFAVVSLSGDPLHPQAATTHVHKDSGSNPTWNYPVKFSVNETLAKDNRLSLEIKLVSDRTLGDTVIGTVHVPLRELLDNPGDDGSSRQVSYQVMKASGKSKGSLNFSYKFGELVPAPAHSASAAKASKAGQEPVMAYPPTGAGSSSAASHGMPQQYPAAAGYGYPPQQAYGGYPQQQPGYGYPPQQPGYGYPPQAGYGYPQQQPGYGYPQQQPGYGYPQQAQKPKKNKFGMGLGAGLLGGALGGMLIGDMVSDAADYDAGYDAGFDDAGGFDF 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0724 299 Gene3D C2 domain 4 137 IPR035892 -
Aed4g0724 299 PANTHER PROTEIN SRC2 1 254 - -
Aed4g0724 299 CDD C2_SRC2_like 5 132 IPR044750 GO:0006952
Aed4g0724 299 Pfam C2 domain 5 106 IPR000008 -
Aed4g0724 299 ProSiteProfiles C2 domain profile. 1 112 IPR000008 -
Aed4g0724 299 SMART C2_3c 5 111 IPR000008 -
Aed4g0724 299 MobiDBLite consensus disorder prediction 230 244 - -
Aed4g0724 299 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 138 IPR035892 -
Aed4g0724 299 MobiDBLite consensus disorder prediction 193 249 - -
Aed4g0724 299 PANTHER INGRESSION PROTEIN FIC1 1 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0724 Aed-Chr4 6047990 6048889 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0724 - - gmx:100217337 279.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0724 4 6047990 6048889 Aed4g0724 4 6047990 6048889 ECH
Aed6g2389 6 25541860 25542612 Aed4g0724 4 6047990 6048889 PCT