Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2375 ATGGCCGTCGTAACCAGCAACGGCAAGCGCCGCCAACATTGGCTCTCCGCCAATCACCACTTTCCATCTCCCAATTCCAAACGACCCAGAGTTTCAACAATGTCCCAAAACCACACGCAATCCTCTACTAGTATCATTTCTAGAATTTCCAAGTACCCTGACGTCAAGCCAGCACTGCACAGGGATGTTCACGCCCCGTGTAGACCACGTAAGTTTGCTCCTCCTGCCTTCAATACGAACTTGAATGCCAGTGTTCACTCTCTTCACCATGAAGAGATTAGTTACGATGTGGGCAACAAGTTAAGTGATAATTACCAAAGGGCGAAAAATTCTGCCTTAGCTAGCATTAGGTTTGGGGAAAAGGGCAAGGATGTGATAGAAGTAGATGCTGATAGTCCCAAGGGTATGGTTTCTGAGGATTCAAGTGTGAAAGAAGATGGACGTGAAGTGCTCTCTGAGGTCACTGAGCACAAGTGGCAAGAGAGTGATTTTGTTGTGATTGAGGTGGAGGATTCCGATGCTAAGGATATGCGTGGTGGCCCTCAGCAGCAGTCAACTTCATCCGTGGTTTCTGAGTTGACTAAGGCTGATTTGAATGTGCTTAGTGCTGCCAAGATGGTGGATGCTCTGTCTCTCACTCCGGACCGTGATCTGTCCTCTGTTCAAGCCTACAAGAAGTTGCTTGAGGCTGTTCACAAGCGTTCGGATACGATTACGAGGCTGTCGGCTGAAATTCGACTTAATGAAAAACGTATGACCACATTGGAATTGTTGCGCCCGAAGAAGGAACTAGTTGAGGAAGTTCCATTGGAACCTTTTATTCCTCTTACTGAAGAGGAAGAAGTTGAGGTTGCAGATGCCTTTTCTGCTAACAGGAGAGAGATCTTGGTTTCCCATGAGAAATCTTGCATTGAGATCTCGGGAGAAAAGTTTCAGTGCCTTAGACCGGGTGCATGGTTAAACGATGAGGTAATAAATTTGTACCTTGAGTTGCTGAAAGAAAGGGAGAGAAGTGAGCCGCAGAAGTTTCTGAAGTGTCATTTTTTCAATACCTTTTTCTACAAGAGGTTAATAAGTGGCAAGAGTGGTTATGATTTCAAATCTGTGAGGAGATGGACCAGCCAGAAGAAATTGGGATATGGCCTACATGATTGTGATAAAATATTTGTGCCTATTCATAAAGAGATCCATTGGTGCTTGGCTGTTATCAATAAGAAAGATAAGAAATTTCAGTATTTGGACTCACTAAGAGGAACGGATACCCGAGTGATGAATGTTCTGGCTAACTATATTGTAGATGAAATAAAGGACAAGACTGGAATAGACATTGATGTAAGTTCTTGGGAAAAAGAATTTGTTGAAGACCTTCCTGAGCAACAGAATGGGTATGATTGTGGAGTGTTTATGATCAAATATGCTGACTTCTATAGCAGAAACTTGGGGCTGTGTTTCAACCAGGTGATGAGCTTCTCTCAAGGAAATCGAGAATGGAATGTAGTGGGAAGTTGCTGGAAAGGAGGTATAAATTCATTTAATTTATGGTTTTGGAGTTTGCAGTGGGTTGTTAATGGAGCAGTTGATGTAGACATTGGTGCAAACCCTTCAGCTGAAGGTGGGGAAGATGAGGGTGTTGATGACCAAGCTGTGAAGGTTGTTGACACTTTCAGACTTGAGGTTTTGACAAGAAGCAGTTTCTTCTTTGTTGGGGAGAGTATGCGTGATGATGGTAGCTTGGTCTTTGCCTACTCATCCCACATTCCTCTACTTTGCATTTGCTTTGAAGGAGATCAAGTGCTAATTAAGGACCTTAGCTATATTTTCTACTCTACTTCTCGGAAAATCCCTTAG 1848 0.4345 MAVVTSNGKRRQHWLSANHHFPSPNSKRPRVSTMSQNHTQSSTSIISRISKYPDVKPALHRDVHAPCRPRKFAPPAFNTNLNASVHSLHHEEISYDVGNKLSDNYQRAKNSALASIRFGEKGKDVIEVDADSPKGMVSEDSSVKEDGREVLSEVTEHKWQESDFVVIEVEDSDAKDMRGGPQQQSTSSVVSELTKADLNVLSAAKMVDALSLTPDRDLSSVQAYKKLLEAVHKRSDTITRLSAEIRLNEKRMTTLELLRPKKELVEEVPLEPFIPLTEEEEVEVADAFSANRREILVSHEKSCIEISGEKFQCLRPGAWLNDEVINLYLELLKERERSEPQKFLKCHFFNTFFYKRLISGKSGYDFKSVRRWTSQKKLGYGLHDCDKIFVPIHKEIHWCLAVINKKDKKFQYLDSLRGTDTRVMNVLANYIVDEIKDKTGIDIDVSSWEKEFVEDLPEQQNGYDCGVFMIKYADFYSRNLGLCFNQVMSFSQGNREWNVVGSCWKGGINSFNLWFWSLQWVVNGAVDVDIGANPSAEGGEDEGVDDQAVKVVDTFRLEVLTRSSFFFVGESMRDDGSLVFAYSSHIPLLCICFEGDQVLIKDLSYIFYSTSRKIP 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2375 615 MobiDBLite consensus disorder prediction 18 45 - -
Aed6g2375 615 SUPERFAMILY Cysteine proteinases 272 487 IPR038765 -
Aed6g2375 615 SUPERFAMILY Mss4-like 519 582 IPR011057 -
Aed6g2375 615 ProSitePatterns Translationally controlled tumor protein (TCTP) domain signature 1. 530 540 IPR018103 -
Aed6g2375 615 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 1 486 - -
Aed6g2375 615 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 1 486 - -
Aed6g2375 615 Gene3D Adenoviral Proteinase; Chain A 273 493 - -
Aed6g2375 615 ProSiteProfiles Ubiquitin-like protease family profile. 304 476 IPR003653 GO:0006508|GO:0008234
Aed6g2375 615 MobiDBLite consensus disorder prediction 17 45 - -
Aed6g2375 615 Pfam Ulp1 protease family, C-terminal catalytic domain 319 479 IPR003653 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2375 Aed-Chr6 25461819 25470864 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2375 K08592 - gmx:100805645 803.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2375 6 25461819 25470864 Aed6g2375 6 25461819 25470864 ECH
Aed6g2375 6 25461819 25470864 Aed4g0711 4 5952680 5956855 PCT