Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0711 ATGGGTGCGATGACGGCGAACCGCAAGCGCACCGAAGAATGCATGAACGTAAACCACACCAATTCCGATTCCCCGAGAAAACGCGCCAAATTCTCGACGAAACCCATTCCATCCGCCGCTACCAGCGCCGTCGCGAGACTCTCCCGGTACCCGGAGATTCACGCGCCATTGGCGAGGGAGGTTCACGCGCCGTGCCCTCCGCGAAAATTCGAACGCTTTACCAAAGTTAGTATCAGTGTCAGTGCCGGCGACGCCATGGGGAACGTTCTGCGTTCGGCGTGGGTGAAATGGAAGATCTCGGTGGAGAAAGGGAAGGAAGTGATCGAGGTGGATGCAGATGCAGAGACAGAGACAGAGAACGAAGAGCGTTACGAGGATTCGAGCGTGGAAGAGGCGCGTGGCGACGGTGAAAAGGTTGTTAGGGTTCAGCAGCAGTCGCAGTCAACGCTGTCGTTTGACTCGGAGATGACGGATGCGGAGTTGAAGGTGGTGAGTGGAGAGAAGGTGTGGGGCTCTGAGATGACGCAGCAGCGTGATTTGGAGAATGTTCAAGTGTATAAGAAGTTGCTTGAGGATGTTGGGAGGAGAAGCGGCACGCTTCAGAGGCTCAATTTTGAGATTGATTTGAATGAGAAGCGTAGGGACAGTTTCAATTTGTTGCGGCCTAAGAAGGAATTGCTTCAGGAACAGAAAGTGCCTCAAGAGCCTTTTGTTGCTCTTACAAGTGAGGAGGAAGATGAGGTTAAACGTGCCTTTTCTGCCAGCCGGAGGAGGATCTTGTTGGTTACCCATGAGAAATCTAACATGGAGATCACGGGAGAGATGTTGCAGTGCCTTAGACCATCTGGATGGTTAAATGATGAGGTGATAAATTTGTACTTGGAATTGCTTAAGGAGAGGGAGCAAAGAGAACCAGAGAAATTTCTGAAATGTCATTTTTTCAGTACCTTTTTCTACAAAAAGTTAATAAGTGGTCCGAGAGGTTATGATTTTAAATCTGTCAGAAGATGGACAACCCAACGGAAATTGGGATACAGTCTACTTGAATGTGATAAAATATTTGTGCCTATCCATCAAGAGATACATTGGTGCTTGGCAGTTATCAATAAGAAAGATAAAAAGTTCCAGTATCTTGACTCAATGAAAGGAGAGGATAGTTCTGTGCTAGAAAAGCTGGCTACATATTTTGTGGATGAAGTAAATGACAAGACTGGACAAGATATTAATGTAAATACCTGGAGAAAAGAATTTGTGAAAGACCTTCCTGTGCAGAAAAATGGGTATGATTGTGGGGTGTTTATGATCAAATATGCAGATTTTTATAGCAGGGGCCTGGAGCTGTGTTTTAACCAGGAAAACATGTCTTACTTCCGGCGTAGGACAGCTAAGGAAATATTGAGATTGAAAGCTGAATGA 1416 0.464 MGAMTANRKRTEECMNVNHTNSDSPRKRAKFSTKPIPSAATSAVARLSRYPEIHAPLAREVHAPCPPRKFERFTKVSISVSAGDAMGNVLRSAWVKWKISVEKGKEVIEVDADAETETENEERYEDSSVEEARGDGEKVVRVQQQSQSTLSFDSEMTDAELKVVSGEKVWGSEMTQQRDLENVQVYKKLLEDVGRRSGTLQRLNFEIDLNEKRRDSFNLLRPKKELLQEQKVPQEPFVALTSEEEDEVKRAFSASRRRILLVTHEKSNMEITGEMLQCLRPSGWLNDEVINLYLELLKEREQREPEKFLKCHFFSTFFYKKLISGPRGYDFKSVRRWTTQRKLGYSLLECDKIFVPIHQEIHWCLAVINKKDKKFQYLDSMKGEDSSVLEKLATYFVDEVNDKTGQDINVNTWRKEFVKDLPVQKNGYDCGVFMIKYADFYSRGLELCFNQENMSYFRRRTAKEILRLKAE 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0711 471 SUPERFAMILY Cysteine proteinases 236 469 IPR038765 -
Aed4g0711 471 Pfam Ulp1 protease family, C-terminal catalytic domain 284 465 IPR003653 GO:0006508|GO:0008234
Aed4g0711 471 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 156 470 - -
Aed4g0711 471 MobiDBLite consensus disorder prediction 17 38 - -
Aed4g0711 471 ProSiteProfiles Ubiquitin-like protease family profile. 269 441 IPR003653 GO:0006508|GO:0008234
Aed4g0711 471 MobiDBLite consensus disorder prediction 111 139 - -
Aed4g0711 471 PANTHER UBIQUITIN-LIKE-SPECIFIC PROTEASE 1A 1 163 - -
Aed4g0711 471 Gene3D Adenoviral Proteinase; Chain A 237 469 - -
Aed4g0711 471 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 1 163 - -
Aed4g0711 471 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 156 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0711 Aed-Chr4 5952680 5956855 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0711 K08592 - gmx:100802161 776.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2375 6 25461819 25470864 Aed4g0711 4 5952680 5956855 PCT