Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2368 ATGCTTGCAGAACAGAAATCCCAAAACACAGGCGCAGCCGATCAGGTATTGGATGAAGTAAAGAGAATGACAGACATAGGGTTCCCAATAGCAGCCATGAGCCTTGTGGGGTACCTAAAAAACATGAGCTTGGTTGTGTGCATGGGAAGGTTGGGAAGCTTGGAGTTAGCGGGAGGTTCTTTGGCCATAGGCTTCACCAACATAACCGGTTACTCTGTCCTCTCAGGTCTAGCCATGGGCATGGACCCACTCTGCACCCAAGCCTTCGGTTCTCGAAACTTGTCCTTACTCTCTCTAACTTTGCAGAGAACAATTCTAATGCTATTGCTCTTTTCTCTCCCCATTTCTCTTCTGTGGTTCAACCTCGAGTCTCTCATGCTTTGCCTTCGCCAGAATCCAGACATAACCCGAATAGCAACCCTCTATTGCCGCTTCGCCATCCCAGACCTCATTGCCAATAGCTTCCTCCACCCTCTTCGTATCTATCTACGCAGCAAAGGCACAACATGGCCACTGTTGTGGTGCACTTTACTATCCATTCTTCTACACCTTCCAACCCTCACTTTTTTAACCTTCAAACTTAACCTTGGCGTACCGGGAATCGCTATTTCCTCCTTTCTTGCCAATTTTAGCAACCTTTTCTTCCTTCTTTTGTACATGTTCTGTACACGTGTCCGCAAGGAACTGTCTTTAGTACACGTGCCGTTATTAATGTCATCACATAATAATAATAATAATAATAATGTAATAAGTAGTACTAGTATTATTGCGAAGGAATGGGGTGTGCTAATGAAATTTTCGGTACAAAGTTGTCTAGCGGTATGCTTGGAATGGTGGTGGTACGAGTTGATGACGATTTCAGCAGGTTACCTTGATAACCCTCGTGTTGCTCTAGCCACGGCTGGGATAGTGATACAAACCACGTCTCTTATGTACACTTTGCCAACAGCACTAAGCGCAGCAGTGTCAACCAGAGTAGGAAATGAACTTGGGGCGGGGCAAGGTGAAAGGGCAAGATTGTCAACTGTGGTAGCCATAGGACTAGCACTTGTAAGCTCGATTTTGGGTTTGTTATGGACCACAATGGGAAGAGAAAGGTGGGGGAGAGTGTTCAGTAGTGATAGTGAGGTGTTACAATTGAGCATGGCAGTTTTACCTATAATTGGAGTGTGTGAGTTAGCGAATTGTCCACAAACCACAAGCTGTGGAATCCTGAGAGGAAGTGCTAGGCCTGGTGTTGGGGCTGTTATAAACTTGTGCTCGTTTTATTTGGTAGGAGCGCCAGTGGCACTTGTTTTGGCCTTTATTTGGAAACTTGGGATGGTGGGTCTTTGTTATGGCTTGCTGGCAGCACAGATCGCATGTGTGGTGTCAATTTTTGTTGTGGTATACAACACTGATTGGGAAAGGGAGTCATTGAAGGCTAGATGCTTGGTGGGAACAAAGACTTCATGTGCCACATTTTCATATCATCAGGACCAGACACTCCTCAACTGTCAACAATCTGTTCTTGTCTTTCTCAACGATAACAACTCCGAAAAGTGA 1545 0.4544 MLAEQKSQNTGAADQVLDEVKRMTDIGFPIAAMSLVGYLKNMSLVVCMGRLGSLELAGGSLAIGFTNITGYSVLSGLAMGMDPLCTQAFGSRNLSLLSLTLQRTILMLLLFSLPISLLWFNLESLMLCLRQNPDITRIATLYCRFAIPDLIANSFLHPLRIYLRSKGTTWPLLWCTLLSILLHLPTLTFLTFKLNLGVPGIAISSFLANFSNLFFLLLYMFCTRVRKELSLVHVPLLMSSHNNNNNNNVISSTSIIAKEWGVLMKFSVQSCLAVCLEWWWYELMTISAGYLDNPRVALATAGIVIQTTSLMYTLPTALSAAVSTRVGNELGAGQGERARLSTVVAIGLALVSSILGLLWTTMGRERWGRVFSSDSEVLQLSMAVLPIIGVCELANCPQTTSCGILRGSARPGVGAVINLCSFYLVGAPVALVLAFIWKLGMVGLCYGLLAAQIACVVSIFVVVYNTDWERESLKARCLVGTKTSCATFSYHQDQTLLNCQQSVLVFLNDNNSEK 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2368 514 Pfam MatE 270 431 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aed6g2368 514 Pfam MatE 29 186 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aed6g2368 514 TIGRFAM matE: MATE efflux family protein 29 444 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aed6g2368 514 CDD MATE_eukaryotic 19 474 IPR045069 GO:0042910|GO:1990961
Aed6g2368 514 PANTHER PROTEIN DETOXIFICATION 55 11 484 - -
Aed6g2368 514 PANTHER MULTIDRUG RESISTANCE PROTEIN 11 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2368 Aed-Chr6 25404685 25406930 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2368 K03327 - gmx:100801932 812.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2368 6 25404685 25406930 Aed6g2368 6 25404685 25406930 ECH
Aed6g2368 6 25404685 25406930 Aed4g0695 4 5846977 5850104 PCT