Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0695 ATGGTATCTGAGGAGAAGTATTCCCAAAAGACTAATTACCCGACAACTTCTGAGGTAGTGGACGAGCTAAAGAGAATGGGGGACATAGGAGTTCCAATAGCAGCAATGAGCCTAGTGGGATACATAAAAAACATGGTCTTAGTTGTGTGCATGGGAAGGTTGGGAAGCCTTGAGCTAGCAGGTGGAGCTTTAGCCATAGGCTTCACAAACATAACCGGTTTTTCAGTCCTTTCCGGTTTAGCCATGGGAATGGAACCACTCTGCACACAAGCTTTCGGTTCAAGAAACTTCTCTTTACTCACTCTCACTCTACAAAGAACAATCTTCATGCTATTGCTGGCTTCACTCCCCATCTCTCTCTTGTGGCTGAAACTCGAGCCTCTCATGCTGTGGCTCCACCAAAACCCTGAGATAACCAAAGTTGCAAGCGTGTACTGCTTCTTCTCAATCCCTGACCTCATTGCCAATAGCCTCCTTCACCCAATTAAAATCTATCTACGTAGCATAGGCACAACATGGCCTCTATTATGGTGCACTTTGCTTTCAATTCTCATACACATCCCTGTGGTGACTCTTTTAACCTTCAAACTCAACCTTGGTGTTCCCGGTATTGCTCTGTCAGGTTTTGTTGCAAACTTCAACACCCTTTTGTTTCTTCTATCGTACATGGTCTACATGCGTGTCTCAAAGGGTTCGACACTTTCCATGCCTTTACTACTAACAACAACAACAACAACAACAACAAAAGAGTGGTGGATGCTAATAAGGTTTTGTATTCAGAGTTGCTTAGGAGTGTGTTTAGAGTGGTGGTGGTATGAGTTCATGACTATTCTAGCGGGATATCTTTACAACCCTCGTGTTGCTTTAGCCACTGCTGGAATAGTGATACAAACAACGTCTCTATTGTACACTTTACCAACGGCTCTGAGTGCATCAGTGTCAACAAGAGTGGGGAACGAGCTAGGGGCAGGTCAACCAGAGAGGGCAAGGTTGTCAACAATAGTAGCAATAGGAATGTCACTAGCGAGTTCAATATTGGGGTTGGTTTGGACCACAGTGGGGAGAGAGAGATGGGGTAGGGTTTTCACAAGTGATGTTGAAGTTTTGGAACTGAGCATGAGGGTTTTGCCTATAATTGGGGTTTGTGAGTTAGCAAACTGTCCTCAAACCACAAGCTGTGGAATCCTTAGAGGGAGTGCAAGGCCTGGTGTTGGGGCAGGGATCAATTTTTACTCGTTTTACCTTGTGGGGGCACCGTTGGCCATAGTGATGGGCTTTCTTTGGAAATTAGGGTTGGTGGGGCTTTGCTATGGGCTTCTCGCAGCACAGGTTGCATGTGTGGTTTCTATTCTGGTTGTGGTATACAACACTGATTGGGAAAGAGAGTCTCTCAAAGCTAAAAGCTTGGTGGGATCAAAGACTTCTAATTCTTCTTCATGTGATCAAGAATCATAA 1455 0.4495 MVSEEKYSQKTNYPTTSEVVDELKRMGDIGVPIAAMSLVGYIKNMVLVVCMGRLGSLELAGGALAIGFTNITGFSVLSGLAMGMEPLCTQAFGSRNFSLLTLTLQRTIFMLLLASLPISLLWLKLEPLMLWLHQNPEITKVASVYCFFSIPDLIANSLLHPIKIYLRSIGTTWPLLWCTLLSILIHIPVVTLLTFKLNLGVPGIALSGFVANFNTLLFLLSYMVYMRVSKGSTLSMPLLLTTTTTTTTKEWWMLIRFCIQSCLGVCLEWWWYEFMTILAGYLYNPRVALATAGIVIQTTSLLYTLPTALSASVSTRVGNELGAGQPERARLSTIVAIGMSLASSILGLVWTTVGRERWGRVFTSDVEVLELSMRVLPIIGVCELANCPQTTSCGILRGSARPGVGAGINFYSFYLVGAPLAIVMGFLWKLGLVGLCYGLLAAQVACVVSILVVVYNTDWERESLKAKSLVGSKTSNSSSCDQES 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0695 484 Pfam MatE 32 189 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aed4g0695 484 Pfam MatE 262 422 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aed4g0695 484 TIGRFAM matE: MATE efflux family protein 32 435 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Aed4g0695 484 PANTHER MULTIDRUG RESISTANCE PROTEIN 14 473 - -
Aed4g0695 484 PANTHER PROTEIN DETOXIFICATION 55 14 473 - -
Aed4g0695 484 CDD MATE_eukaryotic 22 465 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0695 Aed-Chr4 5846977 5850104 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0695 K03327 - gmx:100785533 806.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0695 4 5846977 5850104 Aed4g0695 4 5846977 5850104 ECH
Aed6g2368 6 25404685 25406930 Aed4g0695 4 5846977 5850104 PCT