LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed6g2330	ATGTTCTTCTTCGACTGGTTCTATGGCATTCTAGCTTCCCTCGGTCTCTGGCAGAAAGAAGCCAAAATTCTCTTCCTCGGTCTTGATAATGCCGGAAAGACCACCCTCCTTCACATGCTCAAAGACGAGAGATTAGTTCAGCACCAGCCGACCCAACACCCCACTTCGGAGGAATTGAGCATTGGGAAGATCAAGTTTAAAGCTTTTGATTTGGGGGGGTCATCAAGTTGCCCGCAGAGTCTGGAAAGACTATTACGCAAAGGGAATAGGGACTTCATACGAGTTGTTTTGTTCTCCACTCTTTTTTCCCGTGATATTCTGTTGATTCCTGTTGCTGTGGATGCAGTAGTTTACCTGGTTGATGCCTACGACAAAGAGAGGTTTGCAGAATCAAAGAAGGAGCTTGATTCCTTGCTTTCAGATGAATCATTGGCAACTGTTCCATTTCTTGTGCTAGGCAACAAGATTGACATTCCATATGCTGCATCAGAAGAAGAGCTACGTTATCATCTAGGCCTGACCAATTTCACCACGGGGAAGGGGAAGGTCAACCTCACAGAGTCAAACCTTCGGCCTCTCGAAGTGTTCATGTGCAGCATTGTCCGCAAGATGGGATATGGAGATGGCTTCCAGTGGGTCTCTCAATATATCAAGTAG	657	0.4627	MFFFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGSSSCPQSLERLLRKGNRDFIRVVLFSTLFSRDILLIPVAVDAVVYLVDAYDKERFAESKKELDSLLSDESLATVPFLVLGNKIDIPYAASEEELRYHLGLTNFTTGKGKVNLTESNLRPLEVFMCSIVRKMGYGDGFQWVSQYIK	218

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed6g2330	218	PANTHER	RE74312P	1	218	IPR006687	GO:0005525\|GO:0006886
	Aed6g2330	218	CDD	Sar1	2	217	-	-
	Aed6g2330	218	PANTHER	GTP-BINDING PROTEIN SAR1A	1	218	-	-
	Aed6g2330	218	Gene3D	-	1	218	IPR027417	-
	Aed6g2330	218	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	17	217	IPR027417	-
	Aed6g2330	218	Pfam	ADP-ribosylation factor family	8	76	IPR006689	GO:0003924\|GO:0005525
	Aed6g2330	218	Pfam	ADP-ribosylation factor family	112	217	IPR006689	GO:0003924\|GO:0005525
	Aed6g2330	218	SMART	arf_sub_2	4	194	-	-
	Aed6g2330	218	ProSiteProfiles	small GTPase SAR1 family profile.	14	217	-	-
	Aed6g2330	218	PRINTS	GTP-binding SAR1 protein signature	22	45	IPR006689	GO:0003924\|GO:0005525
	Aed6g2330	218	PRINTS	GTP-binding SAR1 protein signature	50	74	IPR006689	GO:0003924\|GO:0005525
	Aed6g2330	218	ProSiteProfiles	small GTPase Arf family profile.	14	217	-	-
	Aed6g2330	218	SMART	sar_sub_1	4	217	IPR006689	GO:0003924\|GO:0005525

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed6g2330	Aed-Chr6	25194032	25197560	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed6g2330	K07953		-	gmx:100810637	332.413

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aed6g2330	6	25194032	25197560	Aed4g0644	4	5480584	5482360	PCT