LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed4g0644	ATGTTCTTATTTGACTGGTTCTATGGCATTCTCGCTTCCCTCGCTTTCGATTTGGGTGGCCATCAAGTTGCTCGAAGGGTCTGGAAAGACTATTATGCCAAGGTGGATGCTGTTGTGTATTTGGTTGACGCATATGACAAAGAGAGGTTGTCAGAATCTAAGAAGGAGCTCGATGCCTTGCTTTCAGACGAAGCCTTGGCAAATGTTCCATTCCTTGTGCTAGGCAACAAGATTGACCTCCCTTACGCAGCATCAGAAGACGAACTACGATATCACCTAGGCCTGACCAATTTCACCACAGGCAAAGGAAAGATGAACCTCACAGACTCCAACCTTCGACCCCTCGAAGTGTTCATGTGCAGCATTGTGCGCAAGATGGGGTATGGTGAAGGCTTCCAGTGGCTTTCCCAATACATTAAGTAG	423	0.4728	MFLFDWFYGILASLAFDLGGHQVARRVWKDYYAKVDAVVYLVDAYDKERLSESKKELDALLSDEALANVPFLVLGNKIDLPYAASEDELRYHLGLTNFTTGKGKMNLTDSNLRPLEVFMCSIVRKMGYGEGFQWLSQYIK	140

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed4g0644	140	ProSiteProfiles	small GTPase Arf family profile.	1	139	-	-
	Aed4g0644	140	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	16	139	IPR027417	-
	Aed4g0644	140	PANTHER	RE74312P	15	140	IPR006687	GO:0005525\|GO:0006886
	Aed4g0644	140	ProSiteProfiles	small GTPase SAR1 family profile.	1	139	-	-
	Aed4g0644	140	PANTHER	GTP-BINDING PROTEIN SAR1A	15	140	-	-
	Aed4g0644	140	PRINTS	GTP-binding SAR1 protein signature	113	137	IPR006689	GO:0003924\|GO:0005525
	Aed4g0644	140	PRINTS	GTP-binding SAR1 protein signature	69	90	IPR006689	GO:0003924\|GO:0005525
	Aed4g0644	140	PRINTS	GTP-binding SAR1 protein signature	24	49	IPR006689	GO:0003924\|GO:0005525
	Aed4g0644	140	Gene3D	-	8	140	IPR027417	-
	Aed4g0644	140	Pfam	ADP-ribosylation factor family	15	139	IPR006689	GO:0003924\|GO:0005525
	Aed4g0644	140	SMART	sar_sub_1	4	139	IPR006689	GO:0003924\|GO:0005525

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed4g0644	Aed-Chr4	5480584	5482360	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed4g0644	K07953		-	gmx:100499682	229.95

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aed4g0644	4	5480584	5482360	Aed4g0644	4	5480584	5482360	ECH
	Aed4g0644	4	5480584	5482360	Aed8g1700	8	22124625	22127531	ECH
	Aed6g2330	6	25194032	25197560	Aed4g0644	4	5480584	5482360	PCT