Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2328 ATGCAGTCCTCGCTCTCTCTCTCATTCTCCGCCTCCTCCTCCTCCGCCGCCACCGTTTCCAGATCACGTCACTCCTTTCACTCTCCCGCCGCCACTCCTCTCAATCTCCGCTTCTGCGGCTTGAGGCGCGAGGCATTCGGTTCAGGTCTCGCCGCCGCTTCTCTCAACCGCCACCACTACCACCTCCCTCGCCGTCCTCACTCCGCCGCAGTCTTGGCCGCGCTGTCTAGCAATGGCAGCCCTTCCAAATCCTTCGACTACGATTTGCTGATTATCGGCGCCGGCGTTGGCGGCCACGGCGCCGCACTTCATGCCGTCGAGAAGGGTTTGAAAACAGCGGTTGTGGAAGGAGATGTGGTGGGAGGGACATGTGTGAATCGAGGCTGTGTTCCTTCTAAAGCTCTTTTGGCCGTGAGTGGTCGTATGCGAGAACTGAAAAGCGATCATCACTTGAAGTCCTTTGGCTTACAGGTTTCTGCTGCTGGGTATGACAGACAAGGAGTTGCTGATCATGCTAATAATCTTGCTTCAAAAATCCGTAATAATTTGACCAACTCAATGAAGGCACTTGGAGTAGACATACTTACTGGTTTTGGAACAATTCTGGGTCCTCAAAAGGTGAAAGTTGGCTCTTCAAACAAAATAGTAACTGCAAAAAATATCATCATTGCTACTGGTTCTGTTCCTTTTGTTCCTAAGGGCATTGAAATTGATGGGAAGACTGTGATTACCAGTGACCATGCACTCAAACTGGAGTCTGTTCCTGATTGGATAGCAATTGTAGGAAGTGGATATATTGGTCTAGAATTCAGTGATGTATATACAGCACTTGGAAGTGAGGTTACTTTTATAGAAGCTTTAGATCAACTTATGCCAGGATTTGATCCTGAAATTAGCAAGTTGGCTCAGAGGGTCCTTATAAATCCCCGAAATATTGACTATCATACTGGAGTTTTTGCAACCAAGATCACGCCTGCCAAGGATGGAAAACCTGTCTTGATTGAACTTATTGATGCAAAAACCAAGGAGCCGAAAGACACTCTGGAGGTGGATGCTGCACTAATAGCAACTGGAAGGGCTCCATTCACGCAAGGTCTTGGATTGGAGAATATTGATGTGGTAACACAGCGTGGTTTTGTTCCTGTGGATGAGCACATGCGAGTGATTGATGCAAATGGCAAGCTGCCTCAAGCAAGGGAGAAAGGTGAAAAAGAGGGGTTTGAAGTAAGTGTTGCCAAAACAAGTTTTAAAGCTAACACAAAGGCTCTAGCAGAAAACGAAGGAGAGGGACTTGCCAAGTTGATATACAGACCTGACAATGGAGAGATACTAGGAGTTCATATTTTTGGTTTGCATGCAGCAGATCTCATCCATGAAGCATCCAATGCCATAGCATTAGGGACACGTATTCAGGACTTAAAATTTGCAGTTCATGCACATCCAACTTTGTCCGAGGTTCTTGATGAACTATTCAAATCAGCAAAGGTTAAAGCACAAACTTCTAGCCCAGTAAGTGAACCAGTTGCAGTCTAA 1533 0.4664 MQSSLSLSFSASSSSAATVSRSRHSFHSPAATPLNLRFCGLRREAFGSGLAAASLNRHHYHLPRRPHSAAVLAALSSNGSPSKSFDYDLLIIGAGVGGHGAALHAVEKGLKTAVVEGDVVGGTCVNRGCVPSKALLAVSGRMRELKSDHHLKSFGLQVSAAGYDRQGVADHANNLASKIRNNLTNSMKALGVDILTGFGTILGPQKVKVGSSNKIVTAKNIIIATGSVPFVPKGIEIDGKTVITSDHALKLESVPDWIAIVGSGYIGLEFSDVYTALGSEVTFIEALDQLMPGFDPEISKLAQRVLINPRNIDYHTGVFATKITPAKDGKPVLIELIDAKTKEPKDTLEVDAALIATGRAPFTQGLGLENIDVVTQRGFVPVDEHMRVIDANGKLPQAREKGEKEGFEVSVAKTSFKANTKALAENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDLKFAVHAHPTLSEVLDELFKSAKVKAQTSSPVSEPVAV 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2328 510 Pfam Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 403 489 IPR004099 GO:0045454
Aed6g2328 510 PANTHER DIHYDROLIPOAMIDE DEHYDROGENASE 23 392 - -
Aed6g2328 510 SUPERFAMILY FAD/NAD(P)-binding domain 85 307 IPR036188 -
Aed6g2328 510 Gene3D - 396 501 IPR016156 GO:0016491|GO:0050660
Aed6g2328 510 PANTHER DISULFIDE OXIDOREDUCTASE 23 392 - -
Aed6g2328 510 PRINTS Pyridine nucleotide disulphide reductase class-I signature 120 135 - -
Aed6g2328 510 PRINTS Pyridine nucleotide disulphide reductase class-I signature 221 230 - -
Aed6g2328 510 PRINTS Pyridine nucleotide disulphide reductase class-I signature 351 365 - -
Aed6g2328 510 PRINTS Pyridine nucleotide disulphide reductase class-I signature 257 282 - -
Aed6g2328 510 PRINTS Pyridine nucleotide disulphide reductase class-I signature 88 110 - -
Aed6g2328 510 PANTHER DIHYDROLIPOAMIDE DEHYDROGENASE 396 502 - -
Aed6g2328 510 Gene3D - 88 387 IPR036188 -
Aed6g2328 510 Pfam Pyridine nucleotide-disulphide oxidoreductase 87 389 IPR023753 GO:0016491
Aed6g2328 510 Gene3D - 230 357 IPR036188 -
Aed6g2328 510 PRINTS FAD-dependent pyridine nucleotide reductase signature 350 366 - -
Aed6g2328 510 PRINTS FAD-dependent pyridine nucleotide reductase signature 89 108 - -
Aed6g2328 510 PRINTS FAD-dependent pyridine nucleotide reductase signature 218 236 - -
Aed6g2328 510 PRINTS FAD-dependent pyridine nucleotide reductase signature 257 275 - -
Aed6g2328 510 SUPERFAMILY FAD/NAD(P)-binding domain 268 390 IPR036188 -
Aed6g2328 510 PANTHER DISULFIDE OXIDOREDUCTASE 396 502 - -
Aed6g2328 510 SUPERFAMILY FAD/NAD-linked reductases, dimerisation (C-terminal) domain 397 491 IPR016156 GO:0016491|GO:0050660
Aed6g2328 510 ProSitePatterns Pyridine nucleotide-disulphide oxidoreductases class-I active site. 121 131 IPR012999 GO:0016668
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2328 Aed-Chr6 25186274 25192641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2328 1 502 Acyl Lipid Metabolism Gene Families AT3G16950 72.887 0.0 778
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2328 K00382 - gmx:100782004 786.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2328 6 25186274 25192641 Aed6g2328 6 25186274 25192641 ECH
Aed6g2328 6 25186274 25192641 Aed4g0642 4 5472741 5477505 PCT