Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2272 ATGCTATGGAGGAATGAATCTAAGTGTGAGTGTGACTCACTCATCCCTGAATCTCGCTCTTTAACTTTGAAGCATGTCGTAGCCTTCAATGGTTACTCTAGTGTTCATCTTCTCATAATATGGTGGTGTGACTCTTGTTATACATTGTGTATGCAGAAACGGCTACATTTAGTTCAAGGTTTACTGAAAATGAAGAAGTGGTATGGAGGCCTGTTGATAATGGCTTTGGGTATGATGTTGTTTTTCCTCTACAACGTCAAAGGTATTCAGCCACAGAAGCAATCAGCAAAACAGTCGGCATACAATTTCTTCAATAACCATGCACCAGGTGATTCTATTAACGGAAGCAGCAATCTTCCAGTAAACTCTTCCGAGGTGGAACTAAAAAGGGTACCAACACCAACAAAAAGGCCATATTTGGTACATGTTGCAGGGCTGGATGATCTGTATGACATGAAAAATTTATCTAAAGGAGAGATGAATGCTGTGCTTATTTGGGATTCCTTACGTTCCTTGCTGTCGAGGTCAGATGCTTTGGCTGAAACAGCTCAAGGAGTTAAAGAGGCTTCTGTAGCATGGAAAGATTTGCTGTCTATTGTTGAAAAGGACAAAGCTTCTAAGATTAGTAAGATGGATGGCCCAGAAAATCAAAACTGTCCATTCTCTGTAACCTCATCTGGTAAGGCTGTATCAGATAGTGGAATCACTCTTGATCTCCCTTGTGGTCTGGTTGTAGATTCTTCTATTACACTAATTGGAATCCCTAAAAACAGAAGCTTCCAGATTGACCTTGCTGGGCAAGAGCTAGAAGGGGAGCCAAATCCTCCAATTATCTTGCATTATAATGTGAGTCTTCCTGGAGAAAACATGACAGAGGAACCATACATTGTTCAAAATACATGGACTAGTGATTTAGGGTGGGGAAAAGAGGAAAGATGTCCTGCTCGTGGTTCTGCCAACATTCAAGAAGTTGATGGACTTGTTCTCTGCAATGTACAAGCTGTCAGAAGTAACAACAAAAGGAATAAACTTGAACCATGGTTAGTCAGCAGTATTAATGTAGCAGGCAGTTTAAGTCTCTTATCAATCCTGGCTAAAGGTTTACCTGTTACGGAAGATAATGATATAGTTGTTGATATTGAGAATCTGAAGGCTCCTTCTATAGCCAGAAAAAGGCTTGTTTTGTTGATTGGAGTATTTTCTACTGGAAACAACTTTGAGCGCCGCATGGCCCTGAGGAGGTCTTGGATGCAATATGAGGCTGTACGTTCTGGAGAAGTTGCTGTCCGATTTGTCATTGGGCTTCACAAGAACAATAGGGTTAATTTTGAGTTATGGACTGAAGCTCAAGCATATGGAGATATTCAATTAATGCCTTTTGTAGATTATTATAGTTTGATTTCTTTGAAGACAATTGCAGTTTGCATTATGGGGACAAAAATCATCCCTTCAAAATTCATCATGAAAACAGATGATGATGCCTTTGTTAGGATTGATGAGGTGCTTTCCAGCCTTAAAGGAAAGCCATCCGAAGGCCTCTTGTACGGTCTCATATCTTCCAAATCATCTCCTCAGAGGGACGAAGCCAGCAAGTGGTACATCAGTGAGGAGGAATGGCCACATGATACATACCCACCATGGGCACATGGCCCTGGCTATGTTATCTCACGAGACATAGCAAAATTCATTGTCCATGCCCACCAAGAAAGAAAACTCAAGCTGTTTAAATTAGAAGATGTTGCCATGGGCATATGGGTTGAACAGTTCAAGAATGATGGTAAAGAAGTGCATTATGAAAACGATGAGAGGTTTCACAATGCCGGATGCGAATCAAATTATGTACTTGCCCATTATCAAAGCCCGAGGATGGTGCTTTGCCTTTGGGAGAAATTGCAGAATGAACACCAGCCAGCATGCTGTGAGTAG 1926 0.4123 MLWRNESKCECDSLIPESRSLTLKHVVAFNGYSSVHLLIIWWCDSCYTLCMQKRLHLVQGLLKMKKWYGGLLIMALGMMLFFLYNVKGIQPQKQSAKQSAYNFFNNHAPGDSINGSSNLPVNSSEVELKRVPTPTKRPYLVHVAGLDDLYDMKNLSKGEMNAVLIWDSLRSLLSRSDALAETAQGVKEASVAWKDLLSIVEKDKASKISKMDGPENQNCPFSVTSSGKAVSDSGITLDLPCGLVVDSSITLIGIPKNRSFQIDLAGQELEGEPNPPIILHYNVSLPGENMTEEPYIVQNTWTSDLGWGKEERCPARGSANIQEVDGLVLCNVQAVRSNNKRNKLEPWLVSSINVAGSLSLLSILAKGLPVTEDNDIVVDIENLKAPSIARKRLVLLIGVFSTGNNFERRMALRRSWMQYEAVRSGEVAVRFVIGLHKNNRVNFELWTEAQAYGDIQLMPFVDYYSLISLKTIAVCIMGTKIIPSKFIMKTDDDAFVRIDEVLSSLKGKPSEGLLYGLISSKSSPQRDEASKWYISEEEWPHDTYPPWAHGPGYVISRDIAKFIVHAHQERKLKLFKLEDVAMGIWVEQFKNDGKEVHYENDERFHNAGCESNYVLAHYQSPRMVLCLWEKLQNEHQPACCE 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2272 641 Gene3D - 231 364 - -
Aed6g2272 641 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 235 444 IPR001079 GO:0030246
Aed6g2272 641 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 151 318 IPR002659 GO:0006486|GO:0016020|GO:0016758
Aed6g2272 641 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 341 633 IPR002659 GO:0006486|GO:0016020|GO:0016758
Aed6g2272 641 Gene3D - 387 636 - -
Aed6g2272 641 SMART Gal_bind_lectin_2 239 365 IPR001079 GO:0030246
Aed6g2272 641 Pfam Galactoside-binding lectin 236 329 IPR001079 GO:0030246
Aed6g2272 641 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE GALT1 151 318 - -
Aed6g2272 641 SUPERFAMILY Concanavalin A-like lectins/glucanases 236 367 IPR013320 -
Aed6g2272 641 Pfam Galactosyltransferase 407 590 IPR002659 GO:0006486|GO:0016020|GO:0016758
Aed6g2272 641 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE GALT1 341 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2272 Aed-Chr6 24815772 24821223 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2272 121 641 Glycosyltransferase AT3G06440 49.913 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2272 K20843 - gmx:100816729 1041.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2272 6 24815772 24821223 Aed6g2272 6 24815772 24821223 ECH
Aed6g2272 6 24815772 24821223 Aed11g0365 11 3106292 3112562 PCT