Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0365 ATGAAGATTCAGGACTATTGGTTCGTTCATAGGATCATCAAAATGAAAAAGTTGTATGGAGGAGTTCTGATTGCCTCAGTGTTTACATTGTTTACGCTTATGATCCTGCGAAATGGGGTCATGAAAAATCCTATTGGTGAAGGTTATCTGTCTATACCTGTCCTCATTAACGGTACTAATCCTCTAGAATGGATAAATCCCACGGTACCAGCTGCAATTAGAAAATATCCAGAGGGTTCTTCTCAAGTTATTTCTTCTGATATTTTAGTATCTAGCCTCTTTGCTGGGAGCAACTTTTCCAAAGAAGAGCAACAAGCTCTGCAGACATGGAACCAATTGAACTACTTAATTGATCATGTTCAGGGTTTACCCAATGCAGCAGAAGCTATCAAGGAGGCTGCCAGTGCATGGAATAGCCTTATTTCCTCAATTGAAGAGCAAAAGCAAGGTCATGGAAATGATAGTTCAAGAACTAAAGAGAAGCAGTGTCCTCATTTTCTTAATAAAATGAATTCCACTGAACTTGGTAATAGTAGTTATAAACTGCAATTACCTTGTGGCCTGACACAAGGTTCTTCCATCTCTATAATTGGCATTCCAAATGGTCTTCTAGGTAATTTTCAGATTGACTTGGCTGGAGAACCACTTCCTGGCGAGTCTGATCCCCCAATTATTTTGCACTATAATGTTCGGCTTCATGGGGATAAAGTCACTGAGGATCCAGTAATTGTCCAGAACACCTGGACTATAGCTCATGATTGGGGTGAAGAGGATCGTTGTCCATCGCCTACTCCTGAAAAGGTTGATAAAGTTGATGATTTGGAGCAGTGTAATAAGATAGTAGGGAAGAACATTAGCCAACTTCACACAGCTGGCATGCATTCCCACACTTCAAGACTATCTTCAACATCTGAAGAACAATCAATAAATAGGAAATACTTTCCTTTTAAGCAAGGTTACCCATTTGTAGCAACTCTTAGAGTGGGAACTGAGGGAATCCAGATGACAGTTGATGGGAAGCACATAACTTCATTTGCTCTCCGTGATGCTTTGGAGCCATGGCTAGTCAGTGAAATAAAAATCAGAGGGGACCTCAAATTAATATCTCATAAAAGCCTTGTAGTTAATGAAGAGCTGTGGAGAGAAGCACAAACTTATGGAGACGTGCAGCTGATGCCATTTGTTGACTACTACAGCCTCATCACCTGGAAATCTTTAGCAATCTGCATTTTTGGGACACAAGTTTCAGCAAAGTTTGTCATGAAGACAGATGATGATGCATTTGTCCGGGTAGACGAAGTTCTAGACTCTTTGCACAGGATTAATGCTGATCATGGTTTACTATACGGACTCATCAATTCGGATTCCCAACCTCATCGAAATCCAGATAGCAAATGGTACATCAGCCCAGAGGAGTGGAGCGAAGGAACTTATCCTCCTTGGGCTCATGGTCCCGGCTATGTGGTCTCACATGATATAGCAAGGATGGTGTCCAAGAAATATAGAGAAAACCATTTGAAGATGTTTAAATTAGAAGACGTTGCAATGGGAATCTGGATCGCAGACATGAAGAAGGAAGGTCTAGCAGTTCGGTACGAGAATGAGGGCAGAATCTATCCTCCGGGTTGTAAAGATGGCTATGTGGTTGCCCATTACCAAGGCCCCAGGGAGATGCTCTGTTTGTGGCAGAAGCTTCAGCAAGACAAACGTGCAAAATGCTGTGGTGATAGTAGGAGATGA 1740 0.4184 MKIQDYWFVHRIIKMKKLYGGVLIASVFTLFTLMILRNGVMKNPIGEGYLSIPVLINGTNPLEWINPTVPAAIRKYPEGSSQVISSDILVSSLFAGSNFSKEEQQALQTWNQLNYLIDHVQGLPNAAEAIKEAASAWNSLISSIEEQKQGHGNDSSRTKEKQCPHFLNKMNSTELGNSSYKLQLPCGLTQGSSISIIGIPNGLLGNFQIDLAGEPLPGESDPPIILHYNVRLHGDKVTEDPVIVQNTWTIAHDWGEEDRCPSPTPEKVDKVDDLEQCNKIVGKNISQLHTAGMHSHTSRLSSTSEEQSINRKYFPFKQGYPFVATLRVGTEGIQMTVDGKHITSFALRDALEPWLVSEIKIRGDLKLISHKSLVVNEELWREAQTYGDVQLMPFVDYYSLITWKSLAICIFGTQVSAKFVMKTDDDAFVRVDEVLDSLHRINADHGLLYGLINSDSQPHRNPDSKWYISPEEWSEGTYPPWAHGPGYVVSHDIARMVSKKYRENHLKMFKLEDVAMGIWIADMKKEGLAVRYENEGRIYPPGCKDGYVVAHYQGPREMLCLWQKLQQDKRAKCCGDSRR 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0365 579 Gene3D - 171 371 - -
Aed11g0365 579 Pfam Galactosyltransferase 379 524 IPR002659 GO:0006486|GO:0016020|GO:0016758
Aed11g0365 579 PANTHER - 370 567 - -
Aed11g0365 579 PANTHER - 80 357 - -
Aed11g0365 579 SMART Gal_bind_lectin_2 184 372 IPR001079 GO:0030246
Aed11g0365 579 SUPERFAMILY Concanavalin A-like lectins/glucanases 180 369 IPR013320 -
Aed11g0365 579 CDD GLECT 180 369 IPR001079 GO:0030246
Aed11g0365 579 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 370 567 IPR002659 GO:0006486|GO:0016020|GO:0016758
Aed11g0365 579 Gene3D - 376 535 - -
Aed11g0365 579 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 180 374 IPR001079 GO:0030246
Aed11g0365 579 Pfam Galactoside-binding lectin 180 369 IPR001079 GO:0030246
Aed11g0365 579 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 80 357 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0365 Aed-Chr11 3106292 3112562 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0365 370 574 Glycosyltransferase AT1G26810 74.272 2.07e-104 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0365 K14413 - gmx:100782548 679.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0365 11 3106292 3112562 Aed11g0365 11 3106292 3112562 ECH
Aed6g2272 6 24815772 24821223 Aed11g0365 11 3106292 3112562 PCT