Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2151 ATGCTACCTTTCGACAACCCAAACCCAAACACCCTTCATCCCAATCAAAACCAACCTTCTTCTTCAATGGATTCGCTTCCCCCACTCGTGACCACCGCCAATCCAATCCCAAATCTCAATTCACCACTCGATAACTCCTTCATGGATCCCGATTCCGACATTGATGCCCTCATCGGCAGTTTCTTCGACCAACCCAGCCCTCAATTGTTGCCCTCTCTCCCTCACTCCGGATCCACCAGCAACAGCAACGCCGCCATCAAGAGAGGATTCGACACTGCCGTTGATCATTTCGACAACGCCGCGTCCATCAAGCGCGGCAGGATTAACAATGTCGCCGCCGATCAACAACACGCCACCTTTGAAATTCAAAACCCTACTTTCTCTCCCCCCCAGGATCATCGAGGAGGAGAGATACACGCTGATCATTTTATTAATAATAATAATTATGATAATAACTATAATAATAATCGCGCCGTAGGAGGAGGAGAACAGCAGCAGAGGAAACGCCCCGTCTTTGAAATAGATTTTATATCTAACGCCCTTCGTGAAGCTGAAGCTGCAGCTCAAGCTGAATTAGCCTTTCGTGAAGCTCAAGCTCAAGCTGAACCTGAACCTGAACTTGAATTAGGTTTGCCGCAGAATTCAGACGATTACGCCAACTTCGACGACCTCATGGAACCTGATAATGTTGAAGTACAGTATGTGCCGATGAGCTTTAACAGAAGGATTAGGAACATGGAGCGTTTCCGTGTCATAGCGAAGGAAAACGCCATTCACTATGCTCGATTCGACTCCGAGGGTGGCGTTGAAGGCCCGTCGTCATCTCTTACTCCTCAAGGAATTGACGATTCCGCAACTCCATTTGCGATCGCAATGAAAGCGATCAAGGATCGGGCAATGAAGAAGAAAGTGGTGTGTGAAACCTGGGTTCCGAAGGCGAAGAAGAGTAATCAACAAGGGGAGAAGAGGTTTTCGGTTCCGGTGCCCTCTCTTCAAGAACTGTGCCTCGAAATTCTCGCGGATAATGCTGATGCAATGGTTTCGGTTGAGGGTGTCCCCGATGAGCTGAGACGCAAGCTTTCCAAGCTGCTCTGCGACTCCAGAAAGATGAACATTCGATTTCTCGAGCTTCTTCTCAGTGGGTCTCCCACGGAGATTCGCTTAAAAGACTGTTCTTGGTTGACGGAGGAACAGTTTGCCAAATCTTTTCAAATGTGTGACACTACAAGATTGGAGGTGCTGCAACTTGACCAGTGTGGAAGGTGTATACCTGATTATGCATTACTTGTTACTTTGAGACAGTCACCAAGGTGGTTGCCGAAATTGGTTACTCTGTCTCTCAGTGGTGCATGCCGTCTGTCAGATAAAGGATTGCATGTGCTAGTTTCTTCTGCCCCAGCACTGAGATCCATTAATCTAAGCCAGTGCTCCCTTCTCTCATCTGCCAGTATTAATATTTTGGCTGATTCATTGGGAATCTTACTGAAAGAGTTATATCTTGATGATTGCCTAATGATTGATGCTGCACAAATTGTGCCAGGACTGAAGAAACTTGAACATTTAGAGGTGTTGTCATTGGCTGGCATTCAAACTGTCTCTGATGAATTTATCAAGGATTATATCATTGCATGTGGTCACAACATGAAGGAGCTTATTCTAAAAGACTGTAGAGGATTGACTGATGCATCAATAAAAGTCATTGCTGAACACTGTCCTGGGTTGTGTGCACTTGATCTTATGCACTTGGAGAAATTGACGGATTTAACCTTAGGATATCTTACAAATAGTTGTCGAGCACTTCATACATTGAAGCTCTGCCGCAATCCATTCAGTGATGAAGCAATTGCTGCCTTCTTGGATATTTCTGGAGATTCCTTGAAAGAACTTTCACTTAATAATATTAAGAAGGTTGGCCTGCACACAACCTTATCACTTTCTAGGCATGCAAAAAATTTGCATACTCTAGATCTATCTTGGTGCCGGAATTTGACAGACAATGAGTTGGGTTTCATCGTAGATAGCTGCTTCTCACTGAGGTTGCTTAAACTGTTTGGATGTTCTCTGGTGACAGATGTTTTTCTGAATGGGCACTCGAACCCAGAGATTCAGATTCTTGGATTGAAGATGTCTCCTTTATTGCAAACTGTAAAAGTGCCTGATCCCTATCCAGGTCCTTTGCGTTATTCACCAGTTTCAGTAGATTTGATATGA 2211 0.4487 MLPFDNPNPNTLHPNQNQPSSSMDSLPPLVTTANPIPNLNSPLDNSFMDPDSDIDALIGSFFDQPSPQLLPSLPHSGSTSNSNAAIKRGFDTAVDHFDNAASIKRGRINNVAADQQHATFEIQNPTFSPPQDHRGGEIHADHFINNNNYDNNYNNNRAVGGGEQQQRKRPVFEIDFISNALREAEAAAQAELAFREAQAQAEPEPELELGLPQNSDDYANFDDLMEPDNVEVQYVPMSFNRRIRNMERFRVIAKENAIHYARFDSEGGVEGPSSSLTPQGIDDSATPFAIAMKAIKDRAMKKKVVCETWVPKAKKSNQQGEKRFSVPVPSLQELCLEILADNADAMVSVEGVPDELRRKLSKLLCDSRKMNIRFLELLLSGSPTEIRLKDCSWLTEEQFAKSFQMCDTTRLEVLQLDQCGRCIPDYALLVTLRQSPRWLPKLVTLSLSGACRLSDKGLHVLVSSAPALRSINLSQCSLLSSASINILADSLGILLKELYLDDCLMIDAAQIVPGLKKLEHLEVLSLAGIQTVSDEFIKDYIIACGHNMKELILKDCRGLTDASIKVIAEHCPGLCALDLMHLEKLTDLTLGYLTNSCRALHTLKLCRNPFSDEAIAAFLDISGDSLKELSLNNIKKVGLHTTLSLSRHAKNLHTLDLSWCRNLTDNELGFIVDSCFSLRLLKLFGCSLVTDVFLNGHSNPEIQILGLKMSPLLQTVKVPDPYPGPLRYSPVSVDLI 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2151 736 PANTHER UNCHARACTERIZED 202 729 - -
Aed6g2151 736 PANTHER F-BOX/LRR PROTEIN 202 729 - -
Aed6g2151 736 MobiDBLite consensus disorder prediction 8 47 - -
Aed6g2151 736 SMART LRR_CC_2 571 596 IPR006553 -
Aed6g2151 736 SMART LRR_CC_2 597 621 IPR006553 -
Aed6g2151 736 SMART LRR_CC_2 439 464 IPR006553 -
Aed6g2151 736 SMART LRR_CC_2 545 570 IPR006553 -
Aed6g2151 736 SMART LRR_CC_2 649 674 IPR006553 -
Aed6g2151 736 SMART LRR_CC_2 465 490 IPR006553 -
Aed6g2151 736 Gene3D Ribonuclease Inhibitor 510 620 IPR032675 -
Aed6g2151 736 Gene3D Ribonuclease Inhibitor 343 509 IPR032675 -
Aed6g2151 736 Gene3D Ribonuclease Inhibitor 621 716 IPR032675 -
Aed6g2151 736 SUPERFAMILY RNI-like 382 692 - -
Aed6g2151 736 MobiDBLite consensus disorder prediction 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2151 Aed-Chr6 23888300 23894242 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2151 K15082 - gmx:100798274 1007.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2151 6 23888300 23894242 Aed6g2151 6 23888300 23894242 ECH
Aed6g2151 6 23888300 23894242 Aed4g0952 4 8715434 8720363 PCT