Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0952 ATGGTCCAAACAAGAACAAGAACAACAACAACCCCTGAATCCTCTAAACCCCAAGCCATCCACCCCCTCACCCCCGCCCAAACCCACGAACCTTCCGCCGCCGCCTCTCTCCCCCTCCCCCGCCGCAGCCTCCGCCTCTCCTCCGATCCCGATAGGGTTTCCACCGCCTACCGTAACCCTACCAGTCCCCAGCTAGAGGGCTTCCTCAACTTAAGATCTGGAAAGAAGATTCTCAACAGAACAATGGCACCAAACGATTCAGAAGAACAGCAACAACAATATAATGAAACCGAGGCAGTAGGAAATAGTAATGATGACGTGGCAGTGGCGGCTGACGCCGGCAATGCGTTAACGCCGGAAAACTCAGGCCTCATTAACGTCATCCTTATAGCAGATGATTCCTATTCCGACTCTGACGACGACCTCGCCAAATCCTTCGATTCCCACGGCAGCAGGAAACGCAAGAGAGACGATTCAGACGAGCTAAGTAATCATGACGATGATGACGTGGCAGAGAGCTCTGGTGTCAACGTTGCAGCAGAGAATGAGCCGTTGCGTGTTCCAGAACGTTTTACAAACTCCAATGCGACGATAGAGCTTGGTTCCGGTTCCGGTGAGAGGAGGAATGAGAACATGGAACGGTTCCACAACATTGCGCGCCAAAACGCGCCTCGGTTCGCGTTTTTCGCGCCGGAAGAGAAAGACGAGGTGGAAGAGACACGCGACGAAATCGAGGATTGGCCTGGTCCTTTCTCCACGGCTATGAAAATCATCAGAGACCGAGGGATGAAACTGAAAGACGCTGAAACGAGTTCGCAAATTAGCCTGTGTGAGTCTATTGAGTGGGTTCCCAAGGCGAAGGAAGGGAATGTAGCTGTAGGTGTTAACGTTTCGGTTTCAGTTCCGTCGTTGCAAGAGATGTGCCTTAAGATTCTAGTGAAGAATGCTGATGCGATTGCTTCGCTGGAGAGTGTGCCTGATGCGCTGAGGCACCGGCTCAGCCAGTTGCTCTGTGACTCGAGGAGAATCAACGTCCACTTTCTCGAGCTTCTTGTGCAAGGAATTCCCACGGAGATTCGGTTGAGAGATTGCTCGTGGTTGACGGAGGAACAGTTTACTGAGTGTTTTCGAACGTGTGACACGGGGAGTTTGGCGGTACTGCAACTTGATCAGTGTGGCCGCTGTTTGCCTGATTATGTAATAGTTTCTACTTTGGCTCAGTCACCCAGGCATTTAGCTAGCCTAACTACTCTATCCCTCACTGGTGCATGCCGGCTTTCAGATGGAGGTTTGCGTGCACTTGTTTCTTCTGCTCCAGCACTTAGATCGATAAATCTCAGCCAGTGCTCCCTTCTCACATCTGCTAGTATATATATTTTGGCTGAATCATTAAAATCTCTTTTGAAAGAGTTGTACCTTGATGATTGTCATGGCATTGATGCTGCACTAATTGTGCCAGCACTAATTGAGCTTGAACATTTAGAAGTGTTGTCAGTAGTTGGTATTCAAACTGTTTGTGATGAATTTATCAAGAATTATACTGTTGCTCGGGGGCAAAACATGAAAGAGCTTGTTTTGAAGGACTGTACAAACTTGACTGATGCATCAATCAAAGCCATTGTTGAGCACTGTCCAGAATTATGTGTGCTTGATCTTATGAACCTGCACAAACTAACAGATTCATCCATAGGACATCTTACAAATGGTTGTCGTGCACTTCATACGCTGAAGCTTTGTCGTAACTCATTCAGTGATGAAGCAATCGCTGCATTTGTGGAGACCACTGGAGGGTCCCTAAAAGAATTGTCACTTAACAACATTAAGAAGGTTGGTTATCACACAACCTTATCACTTGCAAACCATGCGAAAAATTTGCATTCTCTAGATCTATCTTGGTGCAGAAATTTAACAGACAATGCATTGGGTTTGATTGTGGATAGCTGCTTGGCGCTGAGGTTACTTAAACTTTTTGGATGCTCTCAGGTAACAGATGTATTTCTTAATGGCCACTCAAACCTACAGATCCAGATAATTGGTCTAAAAATGTCTCCTGTGTTGGAACATGTGAAAGTGCCAGATCCTCATAAAGGTGCTTTGAATTATTCATCAGTCTCCAACATAGACTTAGCAGTATAA 2136 0.4686 MVQTRTRTTTTPESSKPQAIHPLTPAQTHEPSAAASLPLPRRSLRLSSDPDRVSTAYRNPTSPQLEGFLNLRSGKKILNRTMAPNDSEEQQQQYNETEAVGNSNDDVAVAADAGNALTPENSGLINVILIADDSYSDSDDDLAKSFDSHGSRKRKRDDSDELSNHDDDDVAESSGVNVAAENEPLRVPERFTNSNATIELGSGSGERRNENMERFHNIARQNAPRFAFFAPEEKDEVEETRDEIEDWPGPFSTAMKIIRDRGMKLKDAETSSQISLCESIEWVPKAKEGNVAVGVNVSVSVPSLQEMCLKILVKNADAIASLESVPDALRHRLSQLLCDSRRINVHFLELLVQGIPTEIRLRDCSWLTEEQFTECFRTCDTGSLAVLQLDQCGRCLPDYVIVSTLAQSPRHLASLTTLSLTGACRLSDGGLRALVSSAPALRSINLSQCSLLTSASIYILAESLKSLLKELYLDDCHGIDAALIVPALIELEHLEVLSVVGIQTVCDEFIKNYTVARGQNMKELVLKDCTNLTDASIKAIVEHCPELCVLDLMNLHKLTDSSIGHLTNGCRALHTLKLCRNSFSDEAIAAFVETTGGSLKELSLNNIKKVGYHTTLSLANHAKNLHSLDLSWCRNLTDNALGLIVDSCLALRLLKLFGCSQVTDVFLNGHSNLQIQIIGLKMSPVLEHVKVPDPHKGALNYSSVSNIDLAV 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0952 711 Gene3D Ribonuclease Inhibitor 616 691 IPR032675 -
Aed4g0952 711 Gene3D Ribonuclease Inhibitor 510 615 IPR032675 -
Aed4g0952 711 MobiDBLite consensus disorder prediction 1 67 - -
Aed4g0952 711 SUPERFAMILY RNI-like 359 665 - -
Aed4g0952 711 MobiDBLite consensus disorder prediction 49 67 - -
Aed4g0952 711 SMART LRR_CC_2 544 569 IPR006553 -
Aed4g0952 711 SMART LRR_CC_2 648 673 IPR006553 -
Aed4g0952 711 SMART LRR_CC_2 570 594 IPR006553 -
Aed4g0952 711 SMART LRR_CC_2 518 543 IPR006553 -
Aed4g0952 711 SMART LRR_CC_2 412 437 IPR006553 -
Aed4g0952 711 SMART LRR_CC_2 622 647 IPR006553 -
Aed4g0952 711 SMART LRR_CC_2 438 463 IPR006553 -
Aed4g0952 711 MobiDBLite consensus disorder prediction 139 172 - -
Aed4g0952 711 MobiDBLite consensus disorder prediction 1 22 - -
Aed4g0952 711 MobiDBLite consensus disorder prediction 188 204 - -
Aed4g0952 711 Gene3D Ribonuclease Inhibitor 296 509 IPR032675 -
Aed4g0952 711 MobiDBLite consensus disorder prediction 139 208 - -
Aed4g0952 711 PANTHER F-BOX/LRR PROTEIN 167 703 - -
Aed4g0952 711 PANTHER UNCHARACTERIZED 167 703 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0952 Aed-Chr4 8715434 8720363 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0952 K15082 - gmx:100808150 895.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0952 4 8715434 8720363 Aed4g0952 4 8715434 8720363 ECH
Aed6g2151 6 23888300 23894242 Aed4g0952 4 8715434 8720363 PCT