Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2139 ATGGCTTCAACTTGGGCAGTTTCAATGGCGGTGCCACTAACTTACGCCGGCCAGAAGAGGGTGGTGGCGCCCACCTCTCTGCGGCCTTCAAAGGCATTGACAGCATCAAAAGGCAACAGAAGGTTTGAAGTGAGGGCTTCCATGAAGGACAAAGTTGTGACGGGTTTGACGGCGGCCGCATTGACAGCTTCAATGGTAGTTCCTGACGTGGCTGAAGCAGCTTCTGTTTCGCCTTCTCTGAAGAACTTCTTGCTCAGCATCGCCGCTGGTGGAGTTGTCGCAGTAGCAATTGTCGGTGCCGTCATTGGTGTTTCCAATTTCGATCCCGTCAAGCGAAGCTGA 342 0.5351 MASTWAVSMAVPLTYAGQKRVVAPTSLRPSKALTASKGNRRFEVRASMKDKVVTGLTAAALTASMVVPDVAEAASVSPSLKNFLLSIAAGGVVAVAIVGAVIGVSNFDPVKRS 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2139 113 Gene3D Single helix bin 75 113 - -
Aed6g2139 113 Pfam Photosystem II reaction centre X protein (PsbX) 76 113 IPR009518 GO:0009523|GO:0015979|GO:0016020
Aed6g2139 113 PANTHER OS07G0673550 PROTEIN 1 113 - -
Aed6g2139 113 PANTHER EXPRESSED PROTEIN 1 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2139 Aed-Chr6 23805377 23805718 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2139 - - gmx:100306291 146.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2139 6 23805377 23805718 Aed6g2139 6 23805377 23805718 ECH
Aed6g2139 6 23805377 23805718 Aed4g0940 4 8594841 8595296 PCT