Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0940 ATGGCTTCCACTTCTGCAGTTTCAATGGCTATGCCGGTAGCCTATGCCAGCCAGAAGCGGGTTGTGCCTAGCTCTGATGCGTTCTTCAAGCCACTGCCTTTACGCTCTTCCAAGGCAATGGCGGCATCAAATTCCAGTGGAAGGTTTCAAGTGAGGGCCTCCATGAAGGAGAAAGTTGTGACGGGGCTCACGGCAGCTGCATTGACGGCTTCGATGATGGTTCCCGATGTGGCCGAGGCTGCCGTCTCACCTTCTCTCAAGAACTTCTTGCTCAGCATCGCAGCGGGTGGAGTTGTTGTTGTAGCCATTGTTGGGGCCGTGATTGGTGTTTCCAACTTCGATCCCGTCAAGCGAAGCTGA 360 0.5444 MASTSAVSMAMPVAYASQKRVVPSSDAFFKPLPLRSSKAMAASNSSGRFQVRASMKEKVVTGLTAAALTASMMVPDVAEAAVSPSLKNFLLSIAAGGVVVVAIVGAVIGVSNFDPVKRS 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0940 119 Pfam Photosystem II reaction centre X protein (PsbX) 82 119 IPR009518 GO:0009523|GO:0015979|GO:0016020
Aed4g0940 119 Gene3D Single helix bin 81 119 - -
Aed4g0940 119 PANTHER OS07G0673550 PROTEIN 1 119 - -
Aed4g0940 119 PANTHER EXPRESSED PROTEIN 1 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0940 Aed-Chr4 8594841 8595296 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0940 - - gmx:100306291 188.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2139 6 23805377 23805718 Aed4g0940 4 8594841 8595296 PCT