Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2101 ATGGCTCTAAACCACCCTTTTTCAACCTACTTCATACTACTACTAGTAACCATAACCCGTTTGATATACACCGTGGGAAAAACCGAGCAATGGAAGAAAGCTCCGATTCTAGCAGAGCTTGACATTGATAAGAACATATCTGACAAGTTCCATGATGACCCTGAAACCATTGAAATGGCTTCTAGGGACTATGGTCATATAGTGCATGAGTTCCCAGCAGCGGTGTTTCGTCCATCTTCTATAGAAGACATAGCCAGATTGATAAAATCCTCATACAATAGCTTTGCCCCTTTTGACATAGCTGCTAGGGGCCAAGGCCACTCCACTCATGGACAAGCCATGGCTCGTGATGGGGTTGTGGTTGACATGGCCAGCCTCAGAAAACAAAGAAACAGAAATGGGGTTGCGATTAGTGTCTCTAACGACCCTTTGTTAGGTCACTATGCTGATGTTGGAGGGGAACAACTCTGGATTGATGTGCTACACGCCACACTTCAATATGGACTTGCACCACTTTCTTGGACTGATTATTTGTACTTGACCGTGGGAGGGACACTTTCCAACGCTGGAATCAGTGGCCAGAGCTTCCGCTATGGACCTCAAATCACCAACGTTCATCAAATGGATGTCATCACTGGAAAAGGAGAGTTCGTAACCTGCTCTTCACAGAAGAACCTGGAGTTATTCCACGCGGTTCTTGGAGGCTTAGGACAATTTGGAGTAATAGCAAGGGCGAGAATTGCTCTTGAGCCAGCACCTAAAAGGGAAATTCAAGTTTTGCTCCAAGGACTAGACTATATCCCTGGATTTTATTATGAGAAAAATGTGTCGTACGTTGAATTCTTGAATAGGGTCCGAAGTGGAGAGTTGAAGCTTCAGTCACAAGGATTGTGGGAAGTTCCTCACCCATGGCTTAATTTGTTTATACCAAAATCCCAAATCTTGGATTTCAATTCAGGAGTATTCAAAGGCATAATTCTTAAAAGAAACATCTCCTCTGGACCAGTCTTGGTTTATCCCATGAATAGAAACAAGTAA 1038 0.4374 MALNHPFSTYFILLLVTITRLIYTVGKTEQWKKAPILAELDIDKNISDKFHDDPETIEMASRDYGHIVHEFPAAVFRPSSIEDIARLIKSSYNSFAPFDIAARGQGHSTHGQAMARDGVVVDMASLRKQRNRNGVAISVSNDPLLGHYADVGGEQLWIDVLHATLQYGLAPLSWTDYLYLTVGGTLSNAGISGQSFRYGPQITNVHQMDVITGKGEFVTCSSQKNLELFHAVLGGLGQFGVIARARIALEPAPKREIQVLLQGLDYIPGFYYEKNVSYVEFLNRVRSGELKLQSQGLWEVPHPWLNLFIPKSQILDFNSGVFKGIILKRNISSGPVLVYPMNRNK 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2101 345 SUPERFAMILY FAD-linked oxidases, C-terminal domain 232 345 IPR016164 GO:0003824|GO:0050660
Aed6g2101 345 Gene3D - 46 140 IPR016167 -
Aed6g2101 345 SUPERFAMILY FAD-binding/transporter-associated domain-like 47 251 IPR036318 GO:0050660
Aed6g2101 345 PANTHER GULONOLACTONE OXIDASE 16 255 - -
Aed6g2101 345 PANTHER GULONOLACTONE OXIDASE 255 345 - -
Aed6g2101 345 PANTHER CYTOKININ DEHYDROGENASE 3 16 255 - -
Aed6g2101 345 PANTHER CYTOKININ DEHYDROGENASE 3 255 345 - -
Aed6g2101 345 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 255 345 IPR015345 GO:0009690|GO:0019139|GO:0050660
Aed6g2101 345 Gene3D - 250 345 IPR016170 -
Aed6g2101 345 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 72 107 IPR006093 GO:0016491
Aed6g2101 345 ProSiteProfiles PCMH-type FAD-binding domain profile. 68 252 IPR016166 GO:0071949
Aed6g2101 345 Gene3D - 141 249 IPR016169 -
Aed6g2101 345 Pfam FAD binding domain 72 221 IPR006094 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2101 Aed-Chr6 23549784 23552698 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2101 K00279 - gmx:100787676 460.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2101 6 23549784 23552698 Aed6g2101 6 23549784 23552698 ECH
Aed6g2101 6 23549784 23552698 Aed4g0901 4 8191050 8194664 PCT