Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0901 ATGGTAGCTGAGAAATACTCTTCCCCCACATACTTCATCCTCCTGTTCATAACCATCACACGTCTGATCTCCACAGTAGGGAAAACCTCCCAATGGGCGAAGGCCGTGGCGCCGCCTCCAGAGCTCGCCTCAATCGTCTCCGCAGACGACGACACGGTCTTCCGTCAGCTCTGGGACAACCCGGAGGCCCTCCTGGGGGCTTCTAGGGACTACGGCAACCTAGTCCACCACACCCCCATGGCGGTGTTCCACCCGGCCTCGGCGAGCGACATCGCCAGGCTGGTCAAGCTGTCCTACAACGGCTCCCTCACCTTAAAGATCGCGGCGAGGGGCCAAGGGCACTCGACACGCGGCCAGGCGATGGCACGCGACGGGGTCGTGGTGGACATGGCAGGGTTCAGAGAGAGAGGGAATGGTGTTGGGATAAGAGTCATGAGTAGTATTAGTAGTGTCGACCCTAACAATGGTTACTACTATTATGCTGATGTTGGAGGAGAACAATTGTGGATCGATGTGCTACACGCCACACTCGAGCATGGACTTGCACCTATGTCATGGACTGATTACTTGTACTTGACGGTTGGAGGGACTCTCTCCAATGCTGGCATCAGTGGCCAGACATTCCGCTATGGTCCTCAAATCACCACTGTCCGCGAAATGGACATCGTCACCGGAAAGGGTGACTTTGTGACATGCTCTCCTAAGACGAATTCGGAGTTGTTTCACGCGGTTCTTGGAGGCTTGGGACAATTTGGAATCATAACAAGGGCAAGAATTGCTCTTGCGCCAGCTCCAAAGAGGGTTAAATGGGTGAGACTTTTGTACAATGATTTTTCTGCATTTACCAAAGACCAAGAGAAATTAATCTCAATGAGTGGAAGAGGGAAATTACAAGAAAATAATGTAAATGGTGGTGCACTGGATTATTTGGAAGGGTTGCTGCTAATGCACCAAGGACCCATAAATAATTGGAGATCTTCATTCTTCCCTTTAGCCGACCATGCACGAATAATTTCGCTAGTTACTAAACACACCGTCCTCTATTGCCTAGAAGTTGCCAAATATTATGATGCCCAAAATGAAAACAATGTGGACAAGGAACTCCAAGTTTTACTACAAGGACTGAACCACATTCCTGGATTTTACTATGAAAAAGATGTCTCATATGTTGAGTTCTTGAATAGAGTCCGAAGTGGAGAGTTGAAGCTACAATCAAAAGGACTTTGGGATGTTCCTCACCCGTGGCTTAATTTGTTTATACCAAAATCTCAAATCATGCAATTTAATTCAGGCGTATTCAAGAACATCATCCTTAAACGAAACATCACCACAGGACCTGTCTTGGTTTACCCCATGAATAGAAACAAGTAA 1371 0.4799 MVAEKYSSPTYFILLFITITRLISTVGKTSQWAKAVAPPPELASIVSADDDTVFRQLWDNPEALLGASRDYGNLVHHTPMAVFHPASASDIARLVKLSYNGSLTLKIAARGQGHSTRGQAMARDGVVVDMAGFRERGNGVGIRVMSSISSVDPNNGYYYYADVGGEQLWIDVLHATLEHGLAPMSWTDYLYLTVGGTLSNAGISGQTFRYGPQITTVREMDIVTGKGDFVTCSPKTNSELFHAVLGGLGQFGIITRARIALAPAPKRVKWVRLLYNDFSAFTKDQEKLISMSGRGKLQENNVNGGALDYLEGLLLMHQGPINNWRSSFFPLADHARIISLVTKHTVLYCLEVAKYYDAQNENNVDKELQVLLQGLNHIPGFYYEKDVSYVEFLNRVRSGELKLQSKGLWDVPHPWLNLFIPKSQIMQFNSGVFKNIILKRNITTGPVLVYPMNRNK 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0901 456 Pfam FAD binding domain 79 233 IPR006094 GO:0050660
Aed4g0901 456 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 79 114 IPR006093 GO:0016491
Aed4g0901 456 Gene3D - 266 456 IPR016170 -
Aed4g0901 456 SUPERFAMILY FAD-binding/transporter-associated domain-like 58 263 IPR036318 GO:0050660
Aed4g0901 456 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 265 456 IPR015345 GO:0009690|GO:0019139|GO:0050660
Aed4g0901 456 PANTHER CYTOKININ DEHYDROGENASE 3 19 456 - -
Aed4g0901 456 Gene3D - 147 265 IPR016169 -
Aed4g0901 456 ProSiteProfiles PCMH-type FAD-binding domain profile. 75 264 IPR016166 GO:0071949
Aed4g0901 456 SUPERFAMILY FAD-linked oxidases, C-terminal domain 265 456 IPR016164 GO:0003824|GO:0050660
Aed4g0901 456 PANTHER GULONOLACTONE OXIDASE 19 456 - -
Aed4g0901 456 Gene3D - 55 146 IPR016167 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0901 Aed-Chr4 8191050 8194664 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0901 K00279 - gmx:100804431 771.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2101 6 23549784 23552698 Aed4g0901 4 8191050 8194664 PCT