Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2099 ATGGCAGACCCAGCGAGTTTGATAGCCAGCTGGTTAACTCCTTCCTCCCTCTTCATCTTGATCAACCTGATGATAGGCACCATAGCAATCACTTCTCGCTACGCTTCCGCGCCCAACAAAAACCATTACCAACCAGAGGACTGCACTCACCCTCGGCCCCAACTCGTTCGAACACCCTCACTGTTAGAGCGACTCACGTCCTTTAATCTCTCCTCACGTGCAGATGCAGAACCGGAACTGGTTCGGACATCCTCACTCTTAGAGCGACTCCCTTCTTTCAATCTTTCTTTCCACAAACATGTCCAACCCGAGTCCGAACCTGAACCTGAAAAGGCGGAACTGGTTCGCAGTCCCTCGCTCTTGCAGCGGATTCAGTCTATAAATTTGTCGCGTCTCTACAGATCGGGAGAGGATCCGGATCCGAATCCGAATCCGGGTAAGGCAGAGATGAGGAAATCGGCGAGCGAGAGAGGGGGTTCGATGGATAGCGAGTGGGAGGAGGAGGTCGAGAAGCGGAGGCCGCAGACGGCGAGGAATGAAACGGCGTCGTCGTGGAGAGGAGAAGACGAAGAAGTTGACGCGAAAGCTGATGATTTCATAAACAGGTTCAAGAAGCAGTTAAGGTTGCAGAGGATTGACTCCCTTCTCCGTTACAGAGGAGGAGGAGGTAGCTCGTGA 678 0.5295 MADPASLIASWLTPSSLFILINLMIGTIAITSRYASAPNKNHYQPEDCTHPRPQLVRTPSLLERLTSFNLSSRADAEPELVRTSSLLERLPSFNLSFHKHVQPESEPEPEKAELVRSPSLLQRIQSINLSRLYRSGEDPDPNPNPGKAEMRKSASERGGSMDSEWEEEVEKRRPQTARNETASSWRGEDEEVDAKADDFINRFKKQLRLQRIDSLLRYRGGGGSS 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2099 225 Pfam Cotton fibre expressed protein 189 219 IPR008480 -
Aed6g2099 225 PANTHER COTTON FIBER (DUF761) 145 219 - -
Aed6g2099 225 PANTHER DUF4408 DOMAIN PROTEIN 145 219 - -
Aed6g2099 225 MobiDBLite consensus disorder prediction 150 192 - -
Aed6g2099 225 MobiDBLite consensus disorder prediction 131 192 - -
Aed6g2099 225 Pfam Domain of unknown function (DUF4408) 6 34 IPR025520 -
Aed6g2099 225 PANTHER COTTON FIBER (DUF761) 3 74 - -
Aed6g2099 225 PANTHER DUF4408 DOMAIN PROTEIN 3 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2099 Aed-Chr6 23539111 23539788 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2099 - - gmx:102664184 275.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2099 6 23539111 23539788 Aed6g2099 6 23539111 23539788 ECH
Aed6g2099 6 23539111 23539788 Aed4g0898 4 8169076 8169894 PCT