Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0898 ATGTCTGAAACAGAAGAAGCTTCAGTTTACGGTGTGATGGCGAGTTGGCTCACACCCTCGTGTCTATTCCTCTTCATCAACCTTGTCATCGGCACCATAGCCATCACCTCTCGTTTCACCAAAACATCTAAAAGACAACACCAACTCCTCCGTTCTCCCTCTTTGCTAGAAAGATTTGCTTCCTTCAGTCTTCACAAACATGAAGAATCGGCAACATCACTTGACAACGTTGTGAATCCGGTCCAAAGCCTGGACAGACTCGACCAGCTTCACAACGTTGTTGACCCGGTCGAGAGTTTGGATGCTAGTAAACTCGACCGGGTTGACTCCTCATCCTTGGACTGGGGTAGGTCTTTTAATTTTAACCTTAGTAAAGTGGATAATATTGAAAGACTTAATCCGGTCCAAGATTTTGATAGAGTTCCTTCCTCGTCTTTGTTGGGCCATAAGCCAGGTTTGCCCCGACTCAACAGGATGGCCTCTGCGTCCTTGTTGGATCGAGTCAGGTCATTTAGTCTTGACTTTAACAAAGTCGAGATTGAAGGGTCTGACCCGATCCAGCAGCAACTGAGCTGTGCTCCCTCAATCCTCCAACGGCTTAAGTCGTCTTTGTCGTTTGACAAATCGGTGTCGGTGAAGGAGGCTGAGCCTGAATCCGAAGCTGAGGTTACAGGTGGCGAAGAGTTGGTGGAGGAAAGGGAAGAAGAAGAAGGGGTGGATGCAAAGGCTGATGATTTCATCAACAGGTTCAGGCAGCAACTGAGGTTACAAAGGCTTGACTCTATCATGCGTTACACGGATATGCTCAAACGAAACTAA 819 0.4737 MSETEEASVYGVMASWLTPSCLFLFINLVIGTIAITSRFTKTSKRQHQLLRSPSLLERFASFSLHKHEESATSLDNVVNPVQSLDRLDQLHNVVDPVESLDASKLDRVDSSSLDWGRSFNFNLSKVDNIERLNPVQDFDRVPSSSLLGHKPGLPRLNRMASASLLDRVRSFSLDFNKVEIEGSDPIQQQLSCAPSILQRLKSSLSFDKSVSVKEAEPESEAEVTGGEELVEEREEEEGVDAKADDFINRFRQQLRLQRLDSIMRYTDMLKRN 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0898 272 Pfam Cotton fibre expressed protein 237 271 IPR008480 -
Aed4g0898 272 MobiDBLite consensus disorder prediction 215 238 - -
Aed4g0898 272 PANTHER COTTON FIBER (DUF761) 7 272 - -
Aed4g0898 272 Pfam Domain of unknown function (DUF4408) 8 39 IPR025520 -
Aed4g0898 272 PANTHER DUF4408 DOMAIN PROTEIN 7 272 - -
Aed4g0898 272 MobiDBLite consensus disorder prediction 221 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0898 Aed-Chr4 8169076 8169894 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0898 - - gmx:102670321 263.462
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0898 4 8169076 8169894 Aed4g0898 4 8169076 8169894 ECH
Aed6g2099 6 23539111 23539788 Aed4g0898 4 8169076 8169894 PCT