Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2094 GGGTTCCCTGTTTGGCTCAAGTATGTTCCGGATATTGCTTTCAGAAGAGACAATGAACCTTTCAAGGTTGGGTTTTTTTCAATTTTGGTCATAGTTGTTATTGTTGCGGCAATGCAAAAATTTACAGAGAAAATTGTGAGCATGATGAAGGAGGAGAAATTGTTCCAGACGCAGGGAGGTCCAATAATTATGTCACAGGCAAGGAATTGGGATATAAATAAGATATATTTATTCACTGAAGCTTGTTCAACTATGACAGGACTTCTACATGAACCAAAATGGGGTCATTTGAGAGATTTGCATAAAGCAATAAAGCTATGTGAGCCAGCTTTAGTGTCTGTAGATCCCACAGTGACATGGCCTGGACATAACCTTGAGATTGGTGCTCAAAGCTCCCAGATGAAGATGACTGGTGTGAACAGTGCATTTGATTGGCAGTCATACAATGAAGAGCCTGCGTCGTCGAATGAGAATGATCCCTTGACAGCATATGCACTCTGGGAGCAGATTAATGTCACCCGAGATTCTACAGATTATCTGTGGTATATGACAGATGTCAACATTGATGCAAATGAAGGTTTTATAAAGAATGGGCAATCTTCTGTTCTTACCGTAATGTCAGCAGGCCATGTTTTGCATGTTTTCATTAATAGTCAACTTTCAGGTACTGTGTACGGGGGACTGGACTCTCATAAATTAACATTTAGTGACAGTGTTACGCTGAGGGTTGGCAATAACAAGATTTCTTTACTTAGTATTGCCGTGGGTCTCCCGAATGTTGGGATACAATATGAGTCATGGAATGCTGGGGTGTTAGGCCCAGTCACACTTAAGGGTCTAAATGAGGGGACTAGAGACTTGTCTAAACAGAAATGGTCTTACAAGATTGGTCTCAAGGGTGAAGCCTTAAACCTTAACACTGTAAGTGGTAGTTGCTCAGTTGAATGGACACAAGGGTCATTATTGGCTAAAAAGCAACCTTTGACATGGTACAAGACAACTTTTAACACACCAGAAGGCAATGATCCATTAGCTATAGACATGATTAGCATGGGAAAGGGTCAAGTATGGATTAATGGCCAAAGCATCGGACGCCATATGCCTGGATATATAGCACATGGTAATTGTGGGGATTGTTATTATGCTGGAACTTTCACTGATGAAAAATGCCGCACAAACTGTGGAGAACCCTCCCAGAGATGGTACCATATTCCTCGGTCGTGGCTGAACCCAAGTGGGAACAACTATCTGGTTGTGTTTGAGGAATGGGGAGGTGAGCCTGCTGGAATTTCTTTGGTGAAAAGAACAACAGAAAGTGTGTGTGCTGATATATATGAAGGGCAACCAACTTTGAAGAGCAGAGAGATGCTAGATTCTGGCAAAGTTAATAGACCAAAGGCCCACTTGTGGTGTCCACCTGGACAAAAAATCTCCCAGATTAAATTTGCTAGTTATGGATTGGCAGAGGGAAGTTGTGGAAACTTTAGAGAAGGAACTTGTCATGCTCACAAATCATATGATGCTCCTCAAAAGAACTGCATTGGCAAGCAATCTTGCTTGGTGACTGTAGCTCCTGAAGTATTTGGGGGAGACCCATGTCCGGGAATTGCTAAGAAGTTCTCAGTTGAGGCACTATGCAGCGAGGATCATGTGATGAAGCAGATTTATTAG 1671 0.4225 GFPVWLKYVPDIAFRRDNEPFKVGFFSILVIVVIVAAMQKFTEKIVSMMKEEKLFQTQGGPIIMSQARNWDINKIYLFTEACSTMTGLLHEPKWGHLRDLHKAIKLCEPALVSVDPTVTWPGHNLEIGAQSSQMKMTGVNSAFDWQSYNEEPASSNENDPLTAYALWEQINVTRDSTDYLWYMTDVNIDANEGFIKNGQSSVLTVMSAGHVLHVFINSQLSGTVYGGLDSHKLTFSDSVTLRVGNNKISLLSIAVGLPNVGIQYESWNAGVLGPVTLKGLNEGTRDLSKQKWSYKIGLKGEALNLNTVSGSCSVEWTQGSLLAKKQPLTWYKTTFNTPEGNDPLAIDMISMGKGQVWINGQSIGRHMPGYIAHGNCGDCYYAGTFTDEKCRTNCGEPSQRWYHIPRSWLNPSGNNYLVVFEEWGGEPAGISLVKRTTESVCADIYEGQPTLKSREMLDSGKVNRPKAHLWCPPGQKISQIKFASYGLAEGSCGNFREGTCHAHKSYDAPQKNCIGKQSCLVTVAPEVFGGDPCPGIAKKFSVEALCSEDHVMKQIY 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2094 556 ProSiteProfiles SUEL-type lectin domain profile. 461 547 IPR000922 GO:0030246
Aed6g2094 556 Gene3D - 458 555 IPR043159 -
Aed6g2094 556 PANTHER BETA-GALACTOSIDASE RELATED 126 541 IPR001944 GO:0004553|GO:0005975
Aed6g2094 556 SUPERFAMILY Galactose-binding domain-like 291 450 IPR008979 -
Aed6g2094 556 PANTHER BETA-GALACTOSIDASE RELATED 86 126 IPR001944 GO:0004553|GO:0005975
Aed6g2094 556 PANTHER BETA-GALACTOSIDASE RELATED 1 69 IPR001944 GO:0004553|GO:0005975
Aed6g2094 556 Pfam Glycosyl hydrolases family 35 1 69 IPR031330 -
Aed6g2094 556 Gene3D - 300 441 - -
Aed6g2094 556 SUPERFAMILY Galactose-binding domain-like 140 281 IPR008979 -
Aed6g2094 556 PANTHER BETA-GALACTOSIDASE 1 69 - -
Aed6g2094 556 Pfam Galactose binding lectin domain 469 546 IPR000922 GO:0030246
Aed6g2094 556 PANTHER BETA-GALACTOSIDASE 126 541 - -
Aed6g2094 556 PANTHER BETA-GALACTOSIDASE 86 126 - -
Aed6g2094 556 PRINTS Glycosyl hydrolase family 35 signature 57 72 IPR001944 GO:0004553|GO:0005975
Aed6g2094 556 PRINTS Glycosyl hydrolase family 35 signature 326 340 IPR001944 GO:0004553|GO:0005975
Aed6g2094 556 PRINTS Glycosyl hydrolase family 35 signature 353 369 IPR001944 GO:0004553|GO:0005975
Aed6g2094 556 Gene3D Glycosidases 1 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2094 Aed-Chr6 23500644 23504946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g2094 1 69 Glycoside Hydrolase AT3G13750 57.971 2.92e-17 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2094 - - gmx:106795462 801.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2094 6 23500644 23504946 Aed6g2094 6 23500644 23504946 ECH
Aed6g2094 6 23500644 23504946 Aed4g0894 4 8099435 8106775 PCT