Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2063 ATGCGCTCAGGAGTTTGTGCATTACAGCAGACCCTCACAGCTGAGGCTGCTTCAGTGTTGAAGCACTCTCTGGGGTTGGCTCGGAGGAGGGGCCATGCACAGGTCACTCCTCTGCATGTGGCTGCCACTTTGCTCAGCCTAAGAGGAAGTTCATTGAGAAGAGCATGCCTCAAGTCTCAGCCTCACCAAACTTCTCATCATCCTCTTCAATGCAGGGCTCTTGAGTTGTGCTTCAATGTTGCCCTCAACAGGCTCCCAACAACACCTTCTCCTTTGATCCACACTCAGCCCTCTCTCTCCAATGCTCTCATTGCTGCATTGAAGAGAGCTCAGGCTCACCAGAGAAGAGGCTGCATAGAGCAACAGCAACAACAGCCTCTTCTCGCCATCAAGGTTGAGCTGGAACAGCTCATCACATCCATCCTTGATGACCCTAGTGTTAGCAGGGTTATGAGAGAAGCTGGCTTCTCCAGCACTGCTGTTAAGAACAACATAGAGGACTCTTCTTCACCTCATTCTGTTTTCCAGTGTTACAATACCTCTGGTGGTGTGTTCTCTTCTCCTTGTTCACCTTCTGCCAGTGATCAGAACCATAGGGGGGAAACAACCACCAATTTCAGGCAGGCTCATCGTTTCTTAACTTCTTATGCTTCTGAGTTCCACCCCTCACTTTTCTTTTCTCCTCCAAAGAATGCAGCACCAGTGTGTTCCATCACTAGTACTGGTGCAGCTTCTTCTAGTAATAAGGATGATATCAGGCTTGTTCTGGATATCCTCTTGAGGAAGAAGAAAAAGAACACTGTGATTGTTGGTGACTCGGTGTCATTAACTGAAGGCCTTGTGGGAGAGCTAATGGGGAGGTTGGAAAGATCAGAAGTGCCTGATGAGTTAAAGTCGACTCATTTTATCAAATTCCAATTCTCACCTGTTTCTTTGGCTTGCATGAAGAGAGATGAAGTTGAGATGAAACTCTTGGAACTGAAAAGGAAGATGGATTCGGTTGCATCAGGAGGAGGGGGTGGCATTTTTTATATTGGAGACCTGAAGTGGACAGTGGAGGATGGAGAAGTTTCAGGTTATAACCCAGTTGATCATCTAGTTTCAGAAATAGGAAAGCTATTCTGTGACTGTGGAACCTCAAATAATAATACTAAGGTTTGGCTTATGGCCACTGCTAGCTATCAAACATACATGAGGTGTCAAATGAGGCAACCTCCTCTTGAGAAGCAATGGGCTCTTCAGGCTGTTCCTGTTCCATCAGGTGGACTTTGCTTGAGTCTTCATGCTCCCAGTTTCCTTGATTCAAAGATGACCATGTCTCATAACCAATCTCATGTGCCGGAAACAAAGCCCTTTGGTAACGTGGAGCAGGAGGATAAACTCAATTGTTGTGAAGAATGTGCCTCCAATTATGAAAAAGAATCCCAATTTCTCAGGCCAGACCAAAAGAAAATGTTGCCTTTCTGGCTTCAGTCTCATAGCACAGAAGACCATAAGAAGGATGAACTAGTCCAATTGAAAAGAAAATGGAATAGACTATGCCTCTGCCTCCACCAAAGCAAACAGCCTCAGAACCAATGGAACTGGAACAACAGTTATAATTCACCAAGCTCTATATCCTTTTCCAACAGTGCCACACATGGCTCGACTTCCAAACTTGTCCCTCGATTCCGGCGCCAACAATCATGCATCATTGAGTTCAATTTCGGCAACAAAAGGGAAGCAACAGGGCCAGTCTTGGATTCCCTTGAGAGCATGGAAGGTAAAGAAGTAAAGACTACTCTTGCTCTTGGCAATGGTGGTTCAGGTGAGACGGTGGGGGATATAACTGATACAACACTGCAACGAGCTCATATTTGTAAACTATTGCAGGAGAATGTGCCATGGCAGTCTGAGACTGTTCCTTCAATAGCAGAAGCCTTGATTGATTCCAAATCAGCAAACCAAAATAACAACATTACTTGGTTACTTGTGCAAGGAAATGACACCATTGGAAAAAGAAGGTTGGCACTTGCAGTTGCAGAATCAGTTTTTGGCTCAACTGATGTGCTCCTTCAATTAGACATGCTAAAGAGAGAGACTTCAATAGCCCCATTTTCTGAAGTGCTGGCAAGAGCATTGAAAACCCAACAACAGCTTGTGGTGCTAATAGAAAATGTTGACTTTGCTGATCCCCAGTTCAAGAAATTCCTCTCTGGTGGATTTGAAACAGGAAAGTTTGCAAATTTCACAGAAGAGAACTCAAGCCAAGTAGTAATATTCATATTGACAAATGGTGGATGTGGATCCAGTAGCATTGAGGAGCAAAATGAAGACTTGGTTATGAAATTGTTGTGGCAGGTCAGTGAAACCAAGCCCAACTTAGAGACGCCCTCTGTTGCAAGCGGGGTCACGGAGCCTTGTTTAGGCCACAAAAGAAGAGCTGAACTTGATTTGTTTTCCAACACCAACAGTTCTCAAGGGAGCAAGAAGAAAGTGTTTTCAAGACAACCAAGCTTTAAGACTCTTGATCTGAACACGAAAGCTGATGAAGAGGACAAAGCAAGAGAGAGTAGCCCCATTTCAAGTGATTTGACTGGAGAAACTCTAGCTGATCCACATGGGTTTCTTGACTCAATTGTGAACCGGTTTGAGTTCAACACAAATCCAGTTAAGGACAGAGAGATGGCAGAGTTGTTATTGTGCAAGTTCAAAGGGTCTTTTGAAGAGGTATATGGGAAGCAGTGTTTGGAGAATTTAAGTGTAGATGAGAGGGTGGTTGAGAATGTTCGTGTTGGGTGTGGTTATTTTAGCAACGGCTTGTTTGAGAAATGGCTGAAAGACGTTTTTCAAAGCAGTTTAGAAACGGAAAACTTTGGAGGGAAGGAGGGTATACTTTTTAGACTTTCTTGGGGTGGTAAAGGAGATACAAAATCGGATAGTGGGTTCATCAGTTCTTCTCTGCCCAAGAGTATCCAACTTAATTACTTCATAGAGTGA 2979 0.4424 MRSGVCALQQTLTAEAASVLKHSLGLARRRGHAQVTPLHVAATLLSLRGSSLRRACLKSQPHQTSHHPLQCRALELCFNVALNRLPTTPSPLIHTQPSLSNALIAALKRAQAHQRRGCIEQQQQQPLLAIKVELEQLITSILDDPSVSRVMREAGFSSTAVKNNIEDSSSPHSVFQCYNTSGGVFSSPCSPSASDQNHRGETTTNFRQAHRFLTSYASEFHPSLFFSPPKNAAPVCSITSTGAASSSNKDDIRLVLDILLRKKKKNTVIVGDSVSLTEGLVGELMGRLERSEVPDELKSTHFIKFQFSPVSLACMKRDEVEMKLLELKRKMDSVASGGGGGIFYIGDLKWTVEDGEVSGYNPVDHLVSEIGKLFCDCGTSNNNTKVWLMATASYQTYMRCQMRQPPLEKQWALQAVPVPSGGLCLSLHAPSFLDSKMTMSHNQSHVPETKPFGNVEQEDKLNCCEECASNYEKESQFLRPDQKKMLPFWLQSHSTEDHKKDELVQLKRKWNRLCLCLHQSKQPQNQWNWNNSYNSPSSISFSNSATHGSTSKLVPRFRRQQSCIIEFNFGNKREATGPVLDSLESMEGKEVKTTLALGNGGSGETVGDITDTTLQRAHICKLLQENVPWQSETVPSIAEALIDSKSANQNNNITWLLVQGNDTIGKRRLALAVAESVFGSTDVLLQLDMLKRETSIAPFSEVLARALKTQQQLVVLIENVDFADPQFKKFLSGGFETGKFANFTEENSSQVVIFILTNGGCGSSSIEEQNEDLVMKLLWQVSETKPNLETPSVASGVTEPCLGHKRRAELDLFSNTNSSQGSKKKVFSRQPSFKTLDLNTKADEEDKARESSPISSDLTGETLADPHGFLDSIVNRFEFNTNPVKDREMAELLLCKFKGSFEEVYGKQCLENLSVDERVVENVRVGCGYFSNGLFEKWLKDVFQSSLETENFGGKEGILFRLSWGGKGDTKSDSGFISSSLPKSIQLNYFIE 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2063 992 Pfam Clp amino terminal domain, pathogenicity island component 26 53 IPR004176 -
Aed6g2063 992 PANTHER PROTEIN SMAX1-LIKE 5 1 956 - -
Aed6g2063 992 ProSiteProfiles Clp repeat (R) domain profile. 8 171 IPR004176 -
Aed6g2063 992 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 956 - -
Aed6g2063 992 Gene3D - 603 791 IPR027417 -
Aed6g2063 992 Gene3D - 244 420 IPR027417 -
Aed6g2063 992 SUPERFAMILY Double Clp-N motif 12 166 IPR036628 -
Aed6g2063 992 Gene3D - 9 170 IPR036628 -
Aed6g2063 992 MobiDBLite consensus disorder prediction 839 860 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2063 Aed-Chr6 23320295 23325149 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2063 - - gmx:100814376 1654.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2063 6 23320295 23325149 Aed6g2063 6 23320295 23325149 ECH
Aed6g2063 6 23320295 23325149 Aed4g0870 4 7763042 7768281 PCT