Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0870 ATGCGCTCAGGAGTTTGTACATTGCAACAGACCCTCACAGTAGAGGCTGCTTCAGTGTTGAAGCACTCTCTCGGGTTGGCACGCAGAAGGGGCCATGCACAGGTCACTCCTCTGCATGTGGCTGCAACATTACTCACCCTAAGAGCCAGTTCCCTAAGAAGGGCTTGTCTCAAGTCTCAGCCACAACAGCAACAACAATACCAAACCAACACACACCCTCTTCAGTGTAGAGCCCTTGAGCTTTGCTTCAATGTTGCACTCAACAGGCTTCCAACAACACCAGGTCCAACCACTACTCTACTTCACAACACTACTCATCAACCCTCTCTTTCAAATGCTCTCATTGCTGCTCTCAAGAGAGCACAGGCTCACCAGAGAAGAGGCTGCATTGAGCAGCAGCAGCAGCAGCCTCTTCTCACCATCAAGGTTGAGCTTGAACAGCTCATTATATCTATCCTTGATGACCCTAGTGTTAGTAGGGTTATGAGAGAGGCTGGTTTCTCAAGCACTGCTGTTAAAACCAACATTGAGGACAACAACAGCAACAACACTAGTTCTTCTTCTTTAGCACCTTCTTCTGTCTTCAACTGCTACAACAGTTTTTCTGGTGCTGGTGGTGGTGTTTTCTCTTCTCCTTGTTCACCTTCTCCTGAGTTTGGTGGTTCTCCTCTTCTGTTTTCTTCTCAGAAGAAGGCTTCGGTGTTTCCCATCACTGAGTACTCACCACCAAACTCTTCTTCCAAGGAGGATATCAAGGTGGTTATTGATGTTCTCTTGAGGAAGAAGAAGAGGAACACTGTGATTGTTGGTGACTCGGTGGCACTCACTGAAGGCCTTGTGGGGGAGCTTATGGGGAAGGTGGAGAGAGGAGAGGTTCCTGATGAGTTAAAGTCTGCACATTTCATCAAGTTTCAGCTTGCACCGGTTGCTTTGAGGTTCATGAAAAGGGATGAGGTGGAGATGAGCCTCTCAGCACTTAAGAGGAAGGTGGATTCTGTTGCTTCATGTGGTGGAGCCATTTTCTATGTTGGAGATTTGAAGTGGACAGTGGAAGCAGCAGCAGCAGCTTCAAGTGATAAAGAGGAATTTGGAGGTGATGTTTATTATAACCCTGTTGATCATCTTGTTGGTGAAATAGGGAAGTTGTTTTGTGACAGCAACACTAAGGTGTGGCTTGTGGCCACTGCAAGTTATCAAACATACATGAGGTGCCAAATGAGGCAAACCCCTCTTGAGACTCAGTGGTCACTTCAAGCTGTTCCTGTTCCATCAGGTGGACTTGGCTTGACTCTCCATGCTGCTGCTTCCAGTGTTCACGATTCAAAAATGACAATCTCCCAGAATCCATGTCATATGCTGGAAACAAAGCTCTTTAGTGGCAACAAGGAGGAGCAGGATAAACTCAACTGTTGTGAAGAATGTGCCTCCAATTATGAAAAAGAAGCTCAGTTATTCAAACCAGGCCAGAACAAACTGTTACCATCCTGGCTTCAGTCTCATACCACTGAAGCCCATCAAAAGGATGAGTTAACTCAGCTGAAAAGGAAATGGAACAGACTATGCCACAGTTTGCACCAGAGCAAGCAGAACCATTGGAGCAACACTTCACATAATGGAAATCACAGTTCAAATGGAAAAATCTACCCTTACAATTCATCATATCCATGGTGGCCAAACCAAGGCAGTGGAAGTGTCTTCACAGATTCAAGTTCAATATCTTTTGCTGATTCAAAACCAGCTTATGGCTCCAACAACAACATTGTCCCTCGGTTCAGGCGCCAGCAATCATGCACCATTGAGTTCAATTTCAGTGATGTGACTCAGAAGAAGCCATCCACAGCCTTGGATTCTTTGAGGGGCATGGAAGGTAATAATAATGAAGTAAAGATTACTCTTGCTCTTGGAAACTCAACATTCTTCGGTGGTTCGGGGCAAACGGTGGAAAATATCATAACTACTACTACTGATAGAACACTGCGACGAGCTCATATTTGTAAACTGTTGCAGGAGAATGTGCCATGGCAATCTGAGACAGTTTCTTCCATAGCTGAGGCCTTGGTTGATTCTAAATCAGCAAAGCAAAGTGCTACAACTTGGCTTTTATTGCAAGGAACTGACTCTATTGGGAAAGAAAGGTTGGCACGTGCCATTGCTGAATCAATGTTTGGCTCAGTTGATTTGCTCCTTCACTTGGACATGCAGAAAAGTAGTAGTAACAAGGAGAATTCAGCTACCCCATTTTGTGAAATGGTGGTTGGAGCATTGAAATCTCATGAGAAGCTTGTGGTTCTGATAGAAAGTTTGGATCTTGCAGATGCCCAGTTCAGGAAGTTTCTTGCAGATGGGTTTGAAACTGCAAAGTTTGGAAATTTAAGCATGACTGAGGAGAGTTCAGGCCAAGCAATATTCATATTGACCAATGGGGACACTAAGATCAGTACTACTACTGAAGAGCAGAACAACAACAAGGACTCAGTGATGAAGTTGGTGCTGCAGATAAGTGAAACCAAGCCTAATTTGGAAACAACAACTTCACCATCACCACCACTTTGTTTGTTGGGTCAGAAGAGAAGATCTGAGGAACTAGATTTGTTTTCCAAGGTTAAGATTCCAAGGTTTGAGGAGAAAGTGTTTTCAAGGCATTCAAGCTTCAACAATCTTGACCTGAACATGAAAGCTGATGAAGAAGAAGAAGATAATGATGATGATGGGAATAGTCATAGTCCAATTTCAAGTGATTTGACAAGGGAAACTGTGGTTGATCCACTTGACTCAATTGAGAACAGGTTTGAGTTGAATGAGAAGGAAAGAGAGGTGGCAGAAATGTTAGTGTCAAGGATAAAAGAGTCTTTTGAAGAGGTATATGGTGGGGGGGTGGTGAATTTTAGTGTAGAGGAGAGGGTGATAAAGGAAATTGGTGTGGGGTGTGGTAAATTTACTAACAGCATGTTTGAGAAATGGCTGAAAGACATTTTTCAAAGAAGTTTATTACAGACAGTTAACTTTGGTGGGGGAAAGGAAGGGGTTGGTATAGGTTTTACACTTTGTTGGGGTGGTAAAGAAGGAGAACATAGGAATTCGGATAGTGGCTTCATGGGTTCTTGTTTGCCCAAGAATGTCCAAGTTAACTACTTCATGGATTGA 3144 0.4383 MRSGVCTLQQTLTVEAASVLKHSLGLARRRGHAQVTPLHVAATLLTLRASSLRRACLKSQPQQQQQYQTNTHPLQCRALELCFNVALNRLPTTPGPTTTLLHNTTHQPSLSNALIAALKRAQAHQRRGCIEQQQQQPLLTIKVELEQLIISILDDPSVSRVMREAGFSSTAVKTNIEDNNSNNTSSSSLAPSSVFNCYNSFSGAGGGVFSSPCSPSPEFGGSPLLFSSQKKASVFPITEYSPPNSSSKEDIKVVIDVLLRKKKRNTVIVGDSVALTEGLVGELMGKVERGEVPDELKSAHFIKFQLAPVALRFMKRDEVEMSLSALKRKVDSVASCGGAIFYVGDLKWTVEAAAAASSDKEEFGGDVYYNPVDHLVGEIGKLFCDSNTKVWLVATASYQTYMRCQMRQTPLETQWSLQAVPVPSGGLGLTLHAAASSVHDSKMTISQNPCHMLETKLFSGNKEEQDKLNCCEECASNYEKEAQLFKPGQNKLLPSWLQSHTTEAHQKDELTQLKRKWNRLCHSLHQSKQNHWSNTSHNGNHSSNGKIYPYNSSYPWWPNQGSGSVFTDSSSISFADSKPAYGSNNNIVPRFRRQQSCTIEFNFSDVTQKKPSTALDSLRGMEGNNNEVKITLALGNSTFFGGSGQTVENIITTTTDRTLRRAHICKLLQENVPWQSETVSSIAEALVDSKSAKQSATTWLLLQGTDSIGKERLARAIAESMFGSVDLLLHLDMQKSSSNKENSATPFCEMVVGALKSHEKLVVLIESLDLADAQFRKFLADGFETAKFGNLSMTEESSGQAIFILTNGDTKISTTTEEQNNNKDSVMKLVLQISETKPNLETTTSPSPPLCLLGQKRRSEELDLFSKVKIPRFEEKVFSRHSSFNNLDLNMKADEEEEDNDDDGNSHSPISSDLTRETVVDPLDSIENRFELNEKEREVAEMLVSRIKESFEEVYGGGVVNFSVEERVIKEIGVGCGKFTNSMFEKWLKDIFQRSLLQTVNFGGGKEGVGIGFTLCWGGKEGEHRNSDSGFMGSCLPKNVQVNYFMD 1047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0870 1047 Coils Coil 461 481 - -
Aed4g0870 1047 Gene3D - 241 424 IPR027417 -
Aed4g0870 1047 Gene3D - 9 182 IPR036628 -
Aed4g0870 1047 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 1020 - -
Aed4g0870 1047 PANTHER PROTEIN SMAX1-LIKE 5 1 1020 - -
Aed4g0870 1047 ProSiteProfiles Clp repeat (R) domain profile. 8 182 IPR004176 -
Aed4g0870 1047 Gene3D - 644 846 IPR027417 -
Aed4g0870 1047 MobiDBLite consensus disorder prediction 894 918 - -
Aed4g0870 1047 SUPERFAMILY Double Clp-N motif 12 177 IPR036628 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0870 Aed-Chr4 7763042 7768281 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0870 - - gmx:102660146 1481.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0870 4 7763042 7768281 Aed4g0870 4 7763042 7768281 ECH
Aed6g2063 6 23320295 23325149 Aed4g0870 4 7763042 7768281 PCT