Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2053 ATGGAACCAGTCGCCGCTAATAGCTACTCCAAGCGCCACCAACGCCAATACACCGAAGGCAAAGTTGGATCACACGTGACAGAGAAGAGAGAATTGGATATTGCAATTGTGAAGGCTACAAGTCACGTAGAATGTCCTCCTAAGGAACGTCATGTTAGAAAAATATTCTATGCAACTTCATCACACCAACCGCGTGCAGATGTGGCTTACTGCATACACACACTTGCCAAGAGGCTTGCAAAGACACGAAATTGGATAGTTGCTATAAAGACATTGATAGTGATTCATAGAATATTGAGAGAGGGTGATCCTACTTTCAAAGATGACCTCATAACCTACTCGCGCAGGGGACGTTTTCTTCAGATATCTAATTTCAAAGATGACTCAAGTGCTCTAGCTTGGGACTGTTCTGCATGGGGACATAGCAGAACACGGATGTTGAGTAGTGAAGAGCTATTGGAGCAGTTGCCTGCACTGCAGCAACTTCTTTACCGCCTAATTGGTTGTGAGCCTGAAGGATTGGTTTTCAGCAATCATCTTCTACAGTATGCACTGGCCTTGGCTGAAAAACTTGCTGACTTCTATGAATCCTGCAAAAGATTGGACCTTGCTAGGAATTTTCAGTTTCCAACCTTGAGAAAGCCACCTGCTTCTTTTCTTGCCACAATGGAAGACTACATTAAAGAAGCACCCCTGACTGCTACTAAGAGACTGGAGTATCACCAAAATGATCAATCACCTCAAAGACAAGAAGAAGAACCCAAAGCATCTGAAGGGGCTCAAGCAATTGAGAAACCAGATGAAGAAGTTAAGGAGGAAGAGCCGGTAGTTATAGATGAAACACAGCCTAAGGAAGAGGAAGCTGAACTTCCTCCTCTGATATCAACTGATGATACTGATGATTTGCTGGGTCTAAACGAAATAAATCCCAAAGCTCAAGAACTAGAAGAAAGCAATGCTTTGGCGCTTGCAATTGTACCATCAGGCGGATATAACTCAAGCAATCTTGCTTTGACTAACATGAGTGGAGCTTCTGGTTGGGAACTTGCACTGGTTACAGCACCAAGTAACCATACAAGCCAAGCAACAGATCGCAAAATGGCTGGTGGGTTTGACAAGCTATTACTAGACAGTTTGTATGACGATGAACATGCAAGGAGACAACTTCAACTCCGTAATGCAGGCTATGGATATGAGGGAATAGATGTACATAATCCATTGGATCGTTATAATAATCAGCAGGATCCATTTGCAATGTCCAACAACATAGCACCTCCAACCAATGTGCAAATGGCATACATGGCTCAACAACAGCAACAGCAACAGCAACAATATAACATGATGATGGTCCCTTACCAGCAGTATCCACAGACTCAATACAATCAACAAATGGCGGTTGCGGGTTCTTCTAATCCATTTAGTGATTCCTTACCCATGCCTAGCTATCCTTACAGTTCCATGCATCAACATCAAGGAAACTACCACTTAATGTAG 1494 0.4317 MEPVAANSYSKRHQRQYTEGKVGSHVTEKRELDIAIVKATSHVECPPKERHVRKIFYATSSHQPRADVAYCIHTLAKRLAKTRNWIVAIKTLIVIHRILREGDPTFKDDLITYSRRGRFLQISNFKDDSSALAWDCSAWGHSRTRMLSSEELLEQLPALQQLLYRLIGCEPEGLVFSNHLLQYALALAEKLADFYESCKRLDLARNFQFPTLRKPPASFLATMEDYIKEAPLTATKRLEYHQNDQSPQRQEEEPKASEGAQAIEKPDEEVKEEEPVVIDETQPKEEEAELPPLISTDDTDDLLGLNEINPKAQELEESNALALAIVPSGGYNSSNLALTNMSGASGWELALVTAPSNHTSQATDRKMAGGFDKLLLDSLYDDEHARRQLQLRNAGYGYEGIDVHNPLDRYNNQQDPFAMSNNIAPPTNVQMAYMAQQQQQQQQQYNMMMVPYQQYPQTQYNQQMAVAGSSNPFSDSLPMPSYPYSSMHQHQGNYHLM 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2053 497 MobiDBLite consensus disorder prediction 241 289 - -
Aed6g2053 497 PANTHER CLATHRIN ASSEMBLY PLANT-LIKE PROTEIN 27 139 - -
Aed6g2053 497 PANTHER CLATHRIN ASSEMBLY PLANT-LIKE PROTEIN 140 188 - -
Aed6g2053 497 PANTHER CLATHRIN ASSEMBLY PROTEIN 140 188 IPR045192 GO:0048268|GO:0072583
Aed6g2053 497 ProSiteProfiles ENTH domain profile. 24 166 IPR013809 -
Aed6g2053 497 PANTHER CLATHRIN ASSEMBLY PLANT-LIKE PROTEIN 188 483 - -
Aed6g2053 497 SUPERFAMILY ENTH/VHS domain 31 140 IPR008942 -
Aed6g2053 497 SUPERFAMILY GAT-like domain 142 229 - -
Aed6g2053 497 CDD ANTH_N 32 139 - -
Aed6g2053 497 Gene3D ANTH domain 141 186 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Aed6g2053 497 Gene3D - 30 140 IPR008942 -
Aed6g2053 497 PANTHER CLATHRIN ASSEMBLY PROTEIN 27 139 IPR045192 GO:0048268|GO:0072583
Aed6g2053 497 PANTHER CLATHRIN ASSEMBLY PROTEIN 188 483 IPR045192 GO:0048268|GO:0072583
Aed6g2053 497 Gene3D ANTH domain 187 231 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Aed6g2053 497 SMART enth_2 30 157 IPR013809 -
Aed6g2053 497 Pfam ANTH domain 144 187 IPR011417 GO:0005543
Aed6g2053 497 Pfam ANTH domain 31 139 IPR011417 GO:0005543
Aed6g2053 497 Pfam ANTH domain 188 229 IPR011417 GO:0005543
Aed6g2053 497 MobiDBLite consensus disorder prediction 242 289 - -
Aed6g2053 497 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2053 Aed-Chr6 23256093 23262308 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2053 K20044 - gmx:100815975 691.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2053 6 23256093 23262308 Aed6g2053 6 23256093 23262308 ECH
Aed6g2053 6 23256093 23262308 Aed4g0859 4 7668208 7679946 PCT