Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0859 ATGGGAACGTTTCAGAGCTTCAGAAAAGCCTATGGAGCTCTCAAGGATTCTACCAAGAAATATTCTATGCAACATCAGCACACCAGCCACGGGCAGATGTGGCATATTGCATTCACAAACTTTCTAAGAGACTTTCCAAGACGCGAAGTTGCTATAAAGATATTGATAGTCATTCATAGGACTTTGAGAGAGGGTGATCCTACCTTTAGAGAAGAGATTCTTAACTACTCACGCAGGGGACACATTCTTCAAATATCCAATTTCAAAGATGACTCAAGCCCCCTAGCTTGGGATTGTTCTGCATGGGTTCGAACCTATGCACTATTTTTAGAAGAAAGACTTGAATGCTTCAGAGTCCTTAAATATGACATAGAATCCGAGCGTTTAGCAAAAGCATCACCAGCTGTAAATAAAGCACATAGCAGAACTCGATCGTTGGCTAGTGATGATTTATTGGAGCATCTACCTGCATTGCAGCAACTTCTATATCGCCTTATTGGTTGTCAGCCTGATGGATGTGCATACAGCAATTATATAGTACAGTATGCATTGGCTCTGCCACCTCCCTCTTTCCTTGCAACAATGGAAGAGTACATTAAAGAAGCACCTCAGACAGGCTATGTTAATAAGAGACTGGAGTATCAGGAAAATGAAGATTCGTCTAAAGAAGAATCAGCATCCAATAAATCTGCATCGCCTCAAGCAAATGAGGAAGTCAATGAGGAAGAGCCGGTGGAAGAGGAAGAAGCAACACCTAAGGAGGAGGAGGAGGAGGTAGAGCCTCCTCCTTTGATATCAACTGATGATGGTACAGATGATTTTCTGGGTCTCAGTGAAATAAATCCAAAAGCTATGGAACTGGATGAAAGCAATGCTTTGGCTCTTGCAATTGTACCACCTGGTGGAAACAATCCAAACAATCTTGCTTTGAGTAACTACGACGGGACAACTGGTTGGGAACTTTCACTGGTTACAACACCAAGTAACCATTCCAGTCAGGCCCCAGATCGCAGAATGGCTGGTGGTTTTGACAAGCTATTATTGGACAGCCTGTATGAAGATGAAAATGCCAGGAGACAGCTCCAACTCCAAAATGCAGGTTATGGACATGGTGGAACAATGGATATACAGAACAATCCATTTGATCATTATAACAACCAGCATGATCCATTTGCAATGTCCAACAACATAGCCCCTCCCCCCAATGTGCAAATGGCACTAATGTCTCAACAGCAGCAGCAGCAACAAATGATGTTCCAACAGCAGCAAAATATGTACCAACAACACAACAACACCATGATGATGGTCCCTCACCAACAAGAATATAACCAATACCCTCAACAGATGCAGAATTCAGGCTTTCATAATCCATTTGGAGATCCCTTACCGGGATGGGACCACATCTTTTTTAATTATGGCTTAGCCACCCAATTTCGCTTCAAGATGCCACCCCGACGCAATGCTGCTTCTGAAAACCATGGCAGGAGGAAGAAGAAAGTCCTTAGGAGGGGGCAGCAGCCTTCCTCACAGCCTCAAGCTCAAGAAGAACCACAACCCCGGCCACTGACTGATGCACAAATGGCTTGTGTCCTTCAGTTTATATGTCAGCAAAATGCTGCTAATCACCGTGCCATCCGGCTCCAGTATGAATCCTCTTATCGCCATGCCTATGCGCAGCATCAAGCCTCTGACTCCACTGCCCCTTTTGCTCGGCTGCACAAGTACAAAAGGAAGAAGCTGGCTCACCGCAGCAACTGGCTCAGATAA 1767 0.446 MGTFQSFRKAYGALKDSTKKYSMQHQHTSHGQMWHIAFTNFLRDFPRREVAIKILIVIHRTLREGDPTFREEILNYSRRGHILQISNFKDDSSPLAWDCSAWVRTYALFLEERLECFRVLKYDIESERLAKASPAVNKAHSRTRSLASDDLLEHLPALQQLLYRLIGCQPDGCAYSNYIVQYALALPPPSFLATMEEYIKEAPQTGYVNKRLEYQENEDSSKEESASNKSASPQANEEVNEEEPVEEEEATPKEEEEEVEPPPLISTDDGTDDFLGLSEINPKAMELDESNALALAIVPPGGNNPNNLALSNYDGTTGWELSLVTTPSNHSSQAPDRRMAGGFDKLLLDSLYEDENARRQLQLQNAGYGHGGTMDIQNNPFDHYNNQHDPFAMSNNIAPPPNVQMALMSQQQQQQQMMFQQQQNMYQQHNNTMMMVPHQQEYNQYPQQMQNSGFHNPFGDPLPGWDHIFFNYGLATQFRFKMPPRRNAASENHGRRKKKVLRRGQQPSSQPQAQEEPQPRPLTDAQMACVLQFICQQNAANHRAIRLQYESSYRHAYAQHQASDSTAPFARLHKYKRKKLAHRSNWLR 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0859 588 MobiDBLite consensus disorder prediction 239 256 - -
Aed4g0859 588 Pfam ANTH domain 50 185 IPR011417 GO:0005543
Aed4g0859 588 SMART enth_2 8 124 IPR013809 -
Aed4g0859 588 MobiDBLite consensus disorder prediction 504 519 - -
Aed4g0859 588 ProSiteProfiles ENTH domain profile. 1 124 IPR013809 -
Aed4g0859 588 MobiDBLite consensus disorder prediction 483 520 - -
Aed4g0859 588 SUPERFAMILY ENTH/VHS domain 34 124 IPR008942 -
Aed4g0859 588 Gene3D ANTH domain 137 187 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Aed4g0859 588 MobiDBLite consensus disorder prediction 214 276 - -
Aed4g0859 588 PANTHER CLATHRIN ASSEMBLY PROTEIN 186 468 IPR045192 GO:0048268|GO:0072583
Aed4g0859 588 PANTHER CLATHRIN ASSEMBLY PROTEIN 50 186 IPR045192 GO:0048268|GO:0072583
Aed4g0859 588 PANTHER CLATHRIN ASSEMBLY PLANT-LIKE PROTEIN 186 468 - -
Aed4g0859 588 PANTHER CLATHRIN ASSEMBLY PLANT-LIKE PROTEIN 50 186 - -
Aed4g0859 588 CDD ANTH_N 50 117 - -
Aed4g0859 588 Gene3D - 13 124 IPR008942 -
Aed4g0859 588 SUPERFAMILY GAT-like domain 138 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0859 Aed-Chr4 7668208 7679946 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0859 K20044 - gmx:100783084 383.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0859 4 7668208 7679946 Aed4g0859 4 7668208 7679946 ECH
Aed6g2053 6 23256093 23262308 Aed4g0859 4 7668208 7679946 PCT