Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2051 ATGCCGCCGGCTCTGATGGATCCTCCATTGCCGGAATCATCGTCAGTGCTGTCTTTAAGCTCCGACGCAGTTTTTCCGGGATCGGCGCCGGAGAGTTGGCGATTAGGGGATCTTAGAGGTTTGCAGTGGCGTATAAATCTTGGGGTGCTACCATCTTCTTCTACTTCTTCTTCCATTGATGATCTTCGTCGCGCCACCGCTAATTCTAGAAGGAGGTATGCGAGTTTGAGAGGGCACCTCCTGGTTGATCCTCATGTGCCAAAGGATGGAACTAGTTCACCCAATGTTGTCATGGACAACCCACTTTCACAAAATCCAGACAGTACATGGAGTCGTTTTTTTCGCAATGCAGAGATGGAGAGGATGGTTGATCAGGATTTATCACGTTTATACCCAGAACATGGCAACTATTTCCAGACGCCAGGATGCCAAGGCATATTGAGACGAATTTTATTACTATGGTGTCTCAAATACCCAGAGTGTGGTTATAGACAAGGAATGCATGAATTACTTGCTCCGGTGCTTTATGTTCTCCAATTTGATGTGGAGTGTCTTTCAGAAGTTCGAAAGCTTTATGAAGATCACTTCACAGACAGATTTGATGACCTCTTTTGTCAAGAGAATGATCTTTCTTACAGCTTTGATTTTAGAAAATCTTCAGACTCGACAGAGGATGAAATTGACCCCAATGGAAATGCAACGAAAATCAATAGTCTTGATGAGCTTGATCCTAAGATACAGAACATTGTATTGCTAAGTGACGCTTATGGGGCTGAAGGTGAACTGGGTGTTGTTTTATCTGATAAATTCATTGAACATGATGCTTATTGTATGTTTGATGCTTTAATGAATGGGGCTCGTGGTTCAATTGCAATGGCTGATTTCTTCTTGTATTCCCCTTTGCCTGGGTCCCATACTGGCTTGCCTCCTGTAATTGAAGCTTCTGCTGCATTGTATCATTTGTTGTCTCATGTGGATTCGTCTCTGCATGGCCATCTTGTTGATCTCGGGGTTGAACCACAGTACTTTGCTCTTCGCTGGTTGCGAGTTTTATTTGGACGGGAATTTTCACTCAGCAGCCTCTTGATAATCTGGGATAAAATCTTTTTATCAGATAATAATAGAGTAGAAAAACATGCTGAGGACAATGCAGACTCTGGTTTTAGGATCTTCAATTCGTCTCGTGGAGCATTTATCTTATCTATGGCTTTAGCAATGATGCTCCATATAAGATCTTCGCTACTTGCAGCTGAAAATCCTACAACCTGTCTCCAGAGATTATTAAACTTCCCTGAGAACACTAACCTTGAGAAACTAATAGAGAAAGCTAAATCCTTGCAGGCTCTTGCACTAAGTGCTGAGATTTCATCCTCAATGCCTTCATTTGCCGAGTATCATAACCGGGGTAAATCAGCTATTGCAAGATCTCACACCCTTTCATCTGAATCAGGTTCACCAAAAACACCTCTGAATTCGGTACCTGATAGCTACTGGGAAGAAAAGTGGAGAGTTGTCCACAAGGCTGAAGAACTCAAACAAGATGGAGTAGAAAAACAGGTTCCAACACGGAAGAAGGGATGGACAGAAAATGTAAAGTTAAGTTTGAACAAAACAGAATGTGACCCCTCTTCATCAAGGATTAAGAGTGGTAAAAAGGAATCCAAGTCACTGGTTAGGCGCAGTTTGTTGGAAGATCTTTCTAAGGAACTTGGCTTTGAGGAAGATACTGAAAAACTCTGTTGTCATGATAATCTGTCTGCAACACTTGAAGAAGAGCAACAGGAACATGGCTTTGAAAGCCGCAACAACTATTCTCCTGAACATAGATGTCTAAGTCAAAACACTAGTGAGGAAAACTCACCTGCTATTTCTTGCCCAGCTAGTCCTCCTAATGATGCCAATGATCACACATATGACTCCGAGAAAAGTAGTGTTGTATCTAGTTTATCCCTTGATGGAATTAATGAAACTTCATATAGTAGTCCCATTGATTCACCTCTTCCAATCTCTGATCATCCTGAGAACGGGCCTCAGACACCAGGGAAAAATAATATTAATAATTCTGCAGGTGATTCAACCACACATTCTACAGAGAGAAAATTGAATAAATTCCAGTGGCTATGGAAGTTTGGGCGGAATAATGGCGAGTTCATGTCAGAGAAAGGAAGTCATGCTTCTGAGGCTGTAAAACCTGTCAACAATTGTAATAATCAAAGTAACACAACACCCTCTTCTACAGCCAACAATAGTAATACTCAAAGTAACACAATAATACCCTCTTCTAAAGTCAATGCACAATGTAGTTCTGTTAGTTGCAAAGGGGAATCTACAGACCAGAATGTGACAGGAGGCACTATGAAGAATATTGGGCAGTCAATGCTTGAGCATATCCAGGTGATTGAGTGTGCTTTCCAACTAGACCGGGGCCAAGGAGCATCATCATTAGATAACATGTCTAAAAATGTTTTGGTTGGTAAAGGGGAGGTTACTACTGCCTTGTCAGCTCTCAAGGAGCTCCGTAAAATTAGCAATCTTTTGTCCGAGATGTGA 2550 0.418 MPPALMDPPLPESSSVLSLSSDAVFPGSAPESWRLGDLRGLQWRINLGVLPSSSTSSSIDDLRRATANSRRRYASLRGHLLVDPHVPKDGTSSPNVVMDNPLSQNPDSTWSRFFRNAEMERMVDQDLSRLYPEHGNYFQTPGCQGILRRILLLWCLKYPECGYRQGMHELLAPVLYVLQFDVECLSEVRKLYEDHFTDRFDDLFCQENDLSYSFDFRKSSDSTEDEIDPNGNATKINSLDELDPKIQNIVLLSDAYGAEGELGVVLSDKFIEHDAYCMFDALMNGARGSIAMADFFLYSPLPGSHTGLPPVIEASAALYHLLSHVDSSLHGHLVDLGVEPQYFALRWLRVLFGREFSLSSLLIIWDKIFLSDNNRVEKHAEDNADSGFRIFNSSRGAFILSMALAMMLHIRSSLLAAENPTTCLQRLLNFPENTNLEKLIEKAKSLQALALSAEISSSMPSFAEYHNRGKSAIARSHTLSSESGSPKTPLNSVPDSYWEEKWRVVHKAEELKQDGVEKQVPTRKKGWTENVKLSLNKTECDPSSSRIKSGKKESKSLVRRSLLEDLSKELGFEEDTEKLCCHDNLSATLEEEQQEHGFESRNNYSPEHRCLSQNTSEENSPAISCPASPPNDANDHTYDSEKSSVVSSLSLDGINETSYSSPIDSPLPISDHPENGPQTPGKNNINNSAGDSTTHSTERKLNKFQWLWKFGRNNGEFMSEKGSHASEAVKPVNNCNNQSNTTPSSTANNSNTQSNTIIPSSKVNAQCSSVSCKGESTDQNVTGGTMKNIGQSMLEHIQVIECAFQLDRGQGASSLDNMSKNVLVGKGEVTTALSALKELRKISNLLSEM 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2051 849 PANTHER YPT/RAB-GAP DOMAIN OF GYP1P SUPERFAMILY PROTEIN 2 787 - -
Aed6g2051 849 MobiDBLite consensus disorder prediction 730 757 - -
Aed6g2051 849 Gene3D - 311 455 - -
Aed6g2051 849 MobiDBLite consensus disorder prediction 590 698 - -
Aed6g2051 849 Pfam Rab-GTPase-TBC domain 120 205 IPR000195 -
Aed6g2051 849 Pfam Rab-GTPase-TBC domain 272 372 IPR000195 -
Aed6g2051 849 SMART tbc_4 32 418 IPR000195 -
Aed6g2051 849 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 104 288 - -
Aed6g2051 849 MobiDBLite consensus disorder prediction 605 665 - -
Aed6g2051 849 MobiDBLite consensus disorder prediction 676 698 - -
Aed6g2051 849 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 2 787 - -
Aed6g2051 849 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 307 447 IPR035969 -
Aed6g2051 849 ProSiteProfiles TBC/rab GAP domain profile. 33 372 IPR000195 -
Aed6g2051 849 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 37 332 IPR035969 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2051 Aed-Chr6 23249317 23254902 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2051 K18469 - gmx:100818700 1369.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2051 6 23249317 23254902 Aed6g2051 6 23249317 23254902 ECH
Aed6g2051 6 23249317 23254902 Aed4g0856 4 7654558 7660198 PCT