Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0856 TTTTCTTTCCTTCTCAGAACCACTTTTTCTCTACACAAACAAACTTATTATTCTCTCTCTCTCTTTTTCTCTCTTCACCGACCAATACATAATAAACTCTCTCTCTATCTCACACAGAAACATGCAACTGTGCAAATCATTGGGTTTCTATTTCTCTGCACAAAACCACACCACCCCATTTCATTTTACTTCATAAAGTCTCTTCCTTTTTCACTTTCCATACTCAGTTCGAAAGTTCGCGTCTTTCTGGATTTTCGCTGCGTTTTACCATCTGGGGTTGTCAGGAATTGCCACACGATCATGCCGCCGGCGCTGTCGGATCCGTTGTCGGTGACTCCGGCGAGCTCAGACGCTATTTTGCAGCTATCGGCTCCGGAGACTCGGCGATTCGGCGATCTTAGAGGATTGCAGTGGCGGATAAATCTCGGGGTGTTGCCGTCTTCGACTTCAACTTCAATTGATGATCTTCGTCGAGTCACCGCTAATTGTAGAAGAAGGTATGCTAGCTTGAGAAGGCGTCTTCTGGTTGAACCACATGTTCCAAAGGATGGAACTAATTCACCCAATCTTGTCATTGACAATCCACTTTCACAAAATCCAGATAGTACATGGGGTCGCTTTTTCCGCAATGCAGAGCTGGAGAGAATGGTTGATCAGGATTTATCACGTTTATATCCAGAACATGGCAGTTTTTTTCAGACTCCAGGATGCCAAAGCATGTTGAGACGAATTTTATTAATGTGGTGTCTCAGGCACCCAGAATGTGGTTATAGACAAGGAATGCATGAATTACTTGCTCCTCTGCTTTATGTTCTCCAAGTTGATTTGGAGCGGCTTTTGGAAATTCGGAAGCTTTACGAAGATCACTTTACAGACAGATTTGATGACCTTTTATGTCAAGAGAATGATCTTTCTTACAGCTTTGATTTTAAAAAATCTCCAGAGTTGATGGATGATGAATTTGGTTCTCATGGAGATGCTGTGAAAGTCAATAGTCTTGAGGAACTTGATCCTGAGATACAGACCATTGTATTACTAAGTGATGCTTATGGAGCTGAAGGTGAACTAGGCATTGTTTTATCTGAGAAATTCGTGGAACATGATGCATACTGTATGTTTGATGCTTTGATGAATGGGGGCCTTGGTTCAGTTGCAATGGCTGATTTCTTCTCTTCAATCCCTATATCTGGGTCCCATAGTGGCCTGCCTCCTGTGATTGAGGCTTCGACTGCATTGTATTATTTGTTGTCTCTTGTAGATTCATCTCTCCATAGCCATCTTTTTGAACTTGGGGTTGAACCTCAGTACTTTTCTCTTCGATGGTTGCGTGTTTTATTCGGACGAGAATTTTCACTTGCCAACCTCTTGATCATATGGGATGAGATCTTTGCATCGGAGAGTAGCAGCATGGAGAAAGGTGCCGATGACTGTGAGTTCAGGATCTTAAATTCACCTCGTGGAGCATTTATCTCAGCTATGGCAGTAGCTATGTTACTTCATTTAAGATCTTCACTACTTGCAACTGAAAACCCTACAAGATGTCTTCAGAGATTATTAAACTTCCCTGAAGACATTAATATTGAAAAACTACTAGAGAAGGCTAAATCCTTGCAGGCTTTTGCACTGAGTGTTGATATTTCATCATCATCACTTTTGTTTTTAGGGTCTCATTACCAAAGTAAATCTATGCATACTCCACCTGTGACCCTTCCATCTGAATCTGTGTCTCCGAAAACTCCTCTGAATTTGTTACCTGATAGCTATTGGGAAGATAAGTGGAGGGTTGCCCACAAGGCTGAAGAACATAAGCAAGATAGTCTAGAAAAACAGGTTGTTCCCAATCGGAAAAAGGGATGGGCAGAAAAGGTGAAATTCAGTTTGAGAAGAGCAAAATCTGGCCCTCCTTTGTCAAGGATTCAAAGTGGAAAAAATTTTAGGCGCAGTTTGTTGCAAGATCTTCGCAAGGCACTTGGCTCAGAGGAAGATGCAGAGCAAATGCAGCCAGATGAAACACTATGCCAGCATGATAATCCTTCTGAAGCAGTTGAAGTACAAGAAGATAGTGGCTGTAATGGTGACAACAGTTACTTGTCTGATGATAGATCTCCGAGTGGAAATTCTGGCAGTGAGGAAGACTTGTCTATATTTTCTGACCCAACTAGTCCTCCTAATGAGGCCAATGATCATGAAATTACCTCAGCGAAAAGTAGTGTTGCATCTAATTCATCTCTAGACGAATGCAACGAAACTTCAGGTACCAGTTCATCATTTCCAATCTCTGATCCTCCTGAGAACATTTCTCAGATATCACAATGCAATTCAGAAAATTTTGAATGCACTGAATCTTTACATAACCTTCCCAATGATCCACCCCTTCCAATCTCTGAGCCTTCTGAGAACATTTCTCAGACATCACAGTGCAATACAGGAAATTCTGAATGCAATGAAACTTCAGATACCAGTCCCAATGATCCACCTGTTCCAACCTCCGATCCTCCCAAGAACATACCTCCAACATCAGGGTGCAATATCGATGAAGCGGTAAATACAGCCACTCCTAGAGAGAAAAAACAGAATAAGTTGCAGTGGTTTTGGCCATTTGGACGGAATAATGCCGAGGCTATCTCTGACAAAGTAGGAGCTTCCACTGAAGCTGCCAACCATGGTAGTACTCAAAACAATACTCCACAACCAGCCTCATCTGCAGCAGCAGCAGCCAATGAGCATGGTAGTTCTGTTAGTTGCAGTGGAGAATCCGTTGACAAGAATGTGATGGGCACTCTAAAGAACATTGGACAGTCTATGCTTGACCATATTCAGGTAATTGAATCTGTTTTCCAACAAGAGCGCAAAGGCCAAGTTACTGCCGTGACAGCTCTCAAAGAGCTTAGGAAAATTAGCAATCTTTTGTCTGAGATGTGA 2922 0.4223 FSFLLRTTFSLHKQTYYSLSLFFSLHRPIHNKLSLYLTQKHATVQIIGFLFLCTKPHHPISFYFIKSLPFSLSILSSKVRVFLDFRCVLPSGVVRNCHTIMPPALSDPLSVTPASSDAILQLSAPETRRFGDLRGLQWRINLGVLPSSTSTSIDDLRRVTANCRRRYASLRRRLLVEPHVPKDGTNSPNLVIDNPLSQNPDSTWGRFFRNAELERMVDQDLSRLYPEHGSFFQTPGCQSMLRRILLMWCLRHPECGYRQGMHELLAPLLYVLQVDLERLLEIRKLYEDHFTDRFDDLLCQENDLSYSFDFKKSPELMDDEFGSHGDAVKVNSLEELDPEIQTIVLLSDAYGAEGELGIVLSEKFVEHDAYCMFDALMNGGLGSVAMADFFSSIPISGSHSGLPPVIEASTALYYLLSLVDSSLHSHLFELGVEPQYFSLRWLRVLFGREFSLANLLIIWDEIFASESSSMEKGADDCEFRILNSPRGAFISAMAVAMLLHLRSSLLATENPTRCLQRLLNFPEDINIEKLLEKAKSLQAFALSVDISSSSLLFLGSHYQSKSMHTPPVTLPSESVSPKTPLNLLPDSYWEDKWRVAHKAEEHKQDSLEKQVVPNRKKGWAEKVKFSLRRAKSGPPLSRIQSGKNFRRSLLQDLRKALGSEEDAEQMQPDETLCQHDNPSEAVEVQEDSGCNGDNSYLSDDRSPSGNSGSEEDLSIFSDPTSPPNEANDHEITSAKSSVASNSSLDECNETSGTSSSFPISDPPENISQISQCNSENFECTESLHNLPNDPPLPISEPSENISQTSQCNTGNSECNETSDTSPNDPPVPTSDPPKNIPPTSGCNIDEAVNTATPREKKQNKLQWFWPFGRNNAEAISDKVGASTEAANHGSTQNNTPQPASSAAAAANEHGSSVSCSGESVDKNVMGTLKNIGQSMLDHIQVIESVFQQERKGQVTAVTALKELRKISNLLSEM 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0856 973 ProSiteProfiles TBC/rab GAP domain profile. 128 466 IPR000195 -
Aed4g0856 973 MobiDBLite consensus disorder prediction 883 918 - -
Aed4g0856 973 Pfam Rab-GTPase-TBC domain 214 274 IPR000195 -
Aed4g0856 973 Pfam Rab-GTPase-TBC domain 365 467 IPR000195 -
Aed4g0856 973 MobiDBLite consensus disorder prediction 679 768 - -
Aed4g0856 973 MobiDBLite consensus disorder prediction 688 768 - -
Aed4g0856 973 MobiDBLite consensus disorder prediction 795 824 - -
Aed4g0856 973 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 105 908 - -
Aed4g0856 973 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 132 426 IPR035969 -
Aed4g0856 973 PANTHER YPT/RAB-GAP DOMAIN OF GYP1P SUPERFAMILY PROTEIN 105 908 - -
Aed4g0856 973 MobiDBLite consensus disorder prediction 780 857 - -
Aed4g0856 973 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 402 538 IPR035969 -
Aed4g0856 973 MobiDBLite consensus disorder prediction 882 918 - -
Aed4g0856 973 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 202 381 - -
Aed4g0856 973 Gene3D - 405 544 - -
Aed4g0856 973 SMART tbc_4 125 509 IPR000195 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0856 Aed-Chr4 7654558 7660198 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0856 K18469 - gmx:100812967 1537.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0856 4 7654558 7660198 Aed4g0856 4 7654558 7660198 ECH
Aed6g2051 6 23249317 23254902 Aed4g0856 4 7654558 7660198 PCT