Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g2038 ATGTCCGTTTCTATGAGAGATTTGGATCCAGCTTTCAAGGGAGCTGGACAAAAGCCGTATCCTGCACTAGCTAACAACAATATATTGTGCAGTTTACAATTGTCATATTTTCATCCTGACATAACTCATTCAAGGCTCTGTTCTATGTTTGGATTGATTTTATGCATGTATTTTTTTTTCCCCTGTGCTTGGGCATTATTCTCCTTAACCATATACAGTGGACTTGAAATATGGCGTATCGAGAATTTTAATCCAGTTCCCATCCCTCAGTCATCTTATGGAAAGTTTTTCACTGGGGACTCCTATATGATCTTGAAGACAACTGGTTCAAAAAGTGGTGCTTTGCGTCATGATATCCATTATTGGCTTGGTAAAGACACCAGCCAGGATGAAGCTGGTGCTGCAGCCATCAAGACAGTTGAGTTGGATGCAGCTCTAGGAGGACGGGCTGTTCAGTATCGTGAAGTACAAGGTCATGAAACTGAAAAGTTTCTCTCTTATTTCAAACCATGTATCATACCTCAAGAAGGTGGAGCTGCCTCAGGTTTTAAACATGTTGAGGCTGAAGAACATAAGACACGGTTGTTTGTGTGCAAAGGGAAACATGTGGTTCCTTTCGCTCGATCTTCACTGAACCATGATGATATTTTTATTCTGGATACCGAGTCCAAAATTTTCCAATTTAATGGTTCTAATTCAAGTATTCAAGAAAGGGCTAAAGCATTGGAAGTTGTACAGTTTATTAAGGATACGTACCATGATGGGAAATGTGATATCGCTTCTATTGAGGATGGAAAGTTGATGGCTGATTCTGAAAGTGGAGAATTCTGGGGTTGCTTTGGGGGCTTTGCCCCTCTTCCACGGAGAACAGTTAGTGATGATGATAAGCATGCTGATTCTCATCCTCCAAAGCTACTTTGTGTTGACAAGGGGAAGACAGAACCTATTGAAACCGATTCTTTGACAAATGAATTACTGGAGACAAACAAATGCTATATTATAGATTGTGGGTTGGAAGTTTTTGCATGGATGGGAAGAAACACGTCTCTTGATGAAAGAAAAAGTGCAAGTGGAGCTGCAGATGAGTTAGTCAGTGGCAGCAGTCGACCAAAGTCCCATATCATTCGTGTAATTGAAGGATTTGAAACAGTAATGTTCAAGTCCAAGTTTGATTCTTGGCCTCAGGCAAGTCATGTAATGTCTGAAAAGGGTCGTGGCAAGGTAGCAGCACTTCTAAAACGTGGAGGATTGGATGTCAAGGGTCTCTTGAAAACTGAGCCCGTAAAAGAAGAACCTGAACCCCACATAGATTGCACAGGACATTTGCAGGTTTGGCGTGTGAATGGTCGGGAAAAAATTCTTCTTCCAGCCACTGATCAGTCAAAATTTTATAATGGAGATTGCTACATCCTTCAATATTCATATCCTGGAGAAGATAAGGAAGAGCATCTTATAGGAACATGGATTGGAAAGACTAGTGTTGAGGAAGAGAGAGCTTCAGCTTTTTCACTAGCAAGCAAAATGGTTGAGTCGATGAAGTTTCTTCCTACCCAGGCTCGTATCTATGAAGGCAGTGAACCCATTCAATTTCATGCCATCCTCCAAAGCTGTATTGTTTTAAAGGGTGGACTTAGTGATGGATACAAGAATTACATTGCGGAGAAGGGAATTCCAGATGAGACATACAATGAGGATGGTGTTGCATTATTCCGCATCCAGGGCACTGGACCAGACAATATGCAAGCTATACAAGTTGAAACAGTTGCTTCCTCCTTGAATTCCTCTTATTGCTACATACTTCATAGTGGGCCCACTATTTTTTCTTGGTCTGGAGGTTTAGCAACTTCAGATGACCAGGAGCTTGTTGAGAGAATGCTGGATTTGATTAAGCCGGACGGACAATGCAAACCACATAAAGAAGGTGTAGAATCGGAACAGTTTTGGGATTTGTTGGGGGGAAAAACGGAATATCCCAATCAGAAGATCACGAGGGGTGCTGAAAATGATCCTCACCTATTTTCTTGCAACTTCTCAGCAGGTAGGAACTATTTTTTTGTTAACCGGACAGATTTATCTGATCTCCATCCCCAATGCAAGTATCTGGATTTATTCTGGTGCAAGTGCATTAATATGAAGCAATGCTTGCAGGTGAAAGAGATTTACAACTTTTCCCAGGATGATTTGATGACAGAAGATATTTACATCTTGGATTGTCACTCGGAAATCTTTGTCTGGGTTGGCCAGCAGGTTGACTCAAAGAGTAGAATGCAGGCTCTAACAATTGGCGAGAAATTTCTTGAGCATGATTTTCTCCTAGAAGCATTATCTCGTGAAACTCCAATATTTATCGTCAAGGAAGGTAGTGAGCCACCTTTCTTCACTCGCTTCTTTAAATGGGAGTCAGCAAAATCTGCAATGCTAGGAAACTCATTTCAAAGGAAGCTTGCAATAGTGAAAAATGGGAAACACAAACGAAGATCATCAGTAACTTATGGGGGAAGGTCTAGTGGTGTGCCAGATAAATCCCAGCGCTCCCGCAGCATGTCTGTCAGTCCTGACCATGTTCGTGTGAGGGGAAGATCTCCAGCCTTTAACGCACTAGCAGCTAATTTTGAGAGCCAAAATACTAGGAACCTTTCAACCCCACCTCCAATGGTTAGAAAACTATACCCAAAATCTACGGGACAGGATACAGCAAAACAACTGGCGACTAAATCTGCAGCCATTGCTCATCTTACTTCTAGTTTTGAGCAACCATCAGCACGATTGATTCCTCGGTCACAAAGAGTGAGTTCAGTTAACACCAAATCAACCCCTGGGACAAATGACCTGGAGGGTTCTATGAGCAGCAGAATAGAATCTCTTACTATACAGGAGGATGTGAAAGAGGGTGAAGCCGAAGATGATGAAGCTCTCCCAGTTTACCCATATGAACGTGTTAACACGGCTTCTACAGATCCTGCAGAAGATATTGACGTGACTAAACGAGAGGCTTATCTGTCAACTGCAGAGTTCCAAGATAAACTTAAGATGGCTAAGAATGAATTTTACGTGTTGCCAAAATGGAAACAGAACAAACTCAAAATGGCGGAAAAACAACAAAAACTTCTTTATAGTAAAAATGTAGTAAAGCATCAATATCAATCTAGATATGTTTGTGCGAAAGAACATTAA 3174 0.4143 MSVSMRDLDPAFKGAGQKPYPALANNNILCSLQLSYFHPDITHSRLCSMFGLILCMYFFFPCAWALFSLTIYSGLEIWRIENFNPVPIPQSSYGKFFTGDSYMILKTTGSKSGALRHDIHYWLGKDTSQDEAGAAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGAASGFKHVEAEEHKTRLFVCKGKHVVPFARSSLNHDDIFILDTESKIFQFNGSNSSIQERAKALEVVQFIKDTYHDGKCDIASIEDGKLMADSESGEFWGCFGGFAPLPRRTVSDDDKHADSHPPKLLCVDKGKTEPIETDSLTNELLETNKCYIIDCGLEVFAWMGRNTSLDERKSASGAADELVSGSSRPKSHIIRVIEGFETVMFKSKFDSWPQASHVMSEKGRGKVAALLKRGGLDVKGLLKTEPVKEEPEPHIDCTGHLQVWRVNGREKILLPATDQSKFYNGDCYILQYSYPGEDKEEHLIGTWIGKTSVEEERASAFSLASKMVESMKFLPTQARIYEGSEPIQFHAILQSCIVLKGGLSDGYKNYIAEKGIPDETYNEDGVALFRIQGTGPDNMQAIQVETVASSLNSSYCYILHSGPTIFSWSGGLATSDDQELVERMLDLIKPDGQCKPHKEGVESEQFWDLLGGKTEYPNQKITRGAENDPHLFSCNFSAGRNYFFVNRTDLSDLHPQCKYLDLFWCKCINMKQCLQVKEIYNFSQDDLMTEDIYILDCHSEIFVWVGQQVDSKSRMQALTIGEKFLEHDFLLEALSRETPIFIVKEGSEPPFFTRFFKWESAKSAMLGNSFQRKLAIVKNGKHKRRSSVTYGGRSSGVPDKSQRSRSMSVSPDHVRVRGRSPAFNALAANFESQNTRNLSTPPPMVRKLYPKSTGQDTAKQLATKSAAIAHLTSSFEQPSARLIPRSQRVSSVNTKSTPGTNDLEGSMSSRIESLTIQEDVKEGEAEDDEALPVYPYERVNTASTDPAEDIDVTKREAYLSTAEFQDKLKMAKNEFYVLPKWKQNKLKMAEKQQKLLYSKNVVKHQYQSRYVCAKEH 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g2038 1057 MobiDBLite consensus disorder prediction 924 947 - -
Aed6g2038 1057 SUPERFAMILY Actin depolymerizing proteins 72 201 - -
Aed6g2038 1057 SMART VHP_1 999 1037 IPR003128 GO:0003779|GO:0007010
Aed6g2038 1057 Gene3D Severin 429 566 IPR029006 -
Aed6g2038 1057 CDD gelsolin_S5_like 565 656 - -
Aed6g2038 1057 CDD gelsolin_S2_like 192 281 - -
Aed6g2038 1057 MobiDBLite consensus disorder prediction 830 850 - -
Aed6g2038 1057 SUPERFAMILY VHP, Villin headpiece domain 959 1030 IPR036886 GO:0003779|GO:0007010
Aed6g2038 1057 Gene3D Severin 296 406 IPR029006 -
Aed6g2038 1057 SUPERFAMILY Actin depolymerizing proteins 189 291 - -
Aed6g2038 1057 SUPERFAMILY Actin depolymerizing proteins 643 798 - -
Aed6g2038 1057 SMART VILL_6 440 537 IPR007122 GO:0051015
Aed6g2038 1057 SMART VILL_6 567 654 IPR007122 GO:0051015
Aed6g2038 1057 SMART VILL_6 702 800 IPR007122 GO:0051015
Aed6g2038 1057 SMART VILL_6 191 283 IPR007122 GO:0051015
Aed6g2038 1057 SMART VILL_6 73 171 IPR007122 GO:0051015
Aed6g2038 1057 SMART VILL_6 303 393 IPR007122 GO:0051015
Aed6g2038 1057 ProSiteProfiles Headpiece (HP) domain profile. 969 1034 IPR003128 GO:0003779|GO:0007010
Aed6g2038 1057 Gene3D Severin 68 186 IPR029006 -
Aed6g2038 1057 SUPERFAMILY Actin depolymerizing proteins 433 576 - -
Aed6g2038 1057 CDD gelsolin_S1_like 74 178 - -
Aed6g2038 1057 CDD gelsolin_S4_like 436 533 - -
Aed6g2038 1057 Gene3D Villin headpiece domain 972 1033 IPR036886 GO:0003779|GO:0007010
Aed6g2038 1057 Pfam Gelsolin repeat 459 529 IPR007123 -
Aed6g2038 1057 Pfam Gelsolin repeat 82 165 IPR007123 -
Aed6g2038 1057 Pfam Gelsolin repeat 203 257 IPR007123 -
Aed6g2038 1057 Pfam Gelsolin repeat 317 386 IPR007123 -
Aed6g2038 1057 Pfam Gelsolin repeat 721 793 IPR007123 -
Aed6g2038 1057 SUPERFAMILY Actin depolymerizing proteins 272 394 - -
Aed6g2038 1057 Gene3D Severin 567 659 IPR029006 -
Aed6g2038 1057 PANTHER VILLIN 72 1029 IPR007122 GO:0051015
Aed6g2038 1057 MobiDBLite consensus disorder prediction 819 857 - -
Aed6g2038 1057 Gene3D Severin 187 295 IPR029006 -
Aed6g2038 1057 PRINTS Gelsolin family signature 640 659 IPR007122 GO:0051015
Aed6g2038 1057 PRINTS Gelsolin family signature 580 600 IPR007122 GO:0051015
Aed6g2038 1057 PRINTS Gelsolin family signature 459 475 IPR007122 GO:0051015
Aed6g2038 1057 PRINTS Gelsolin family signature 484 502 IPR007122 GO:0051015
Aed6g2038 1057 PRINTS Gelsolin family signature 517 537 IPR007122 GO:0051015
Aed6g2038 1057 PRINTS Gelsolin family signature 372 393 IPR007122 GO:0051015
Aed6g2038 1057 CDD gelsolin_S3_like 303 392 - -
Aed6g2038 1057 CDD gelsolin_S6_like 708 799 - -
Aed6g2038 1057 Gene3D Severin 660 815 IPR029006 -
Aed6g2038 1057 Pfam Villin headpiece domain 999 1029 IPR003128 GO:0003779|GO:0007010
Aed6g2038 1057 PANTHER VILLIN-4 72 1029 - -
Aed6g2038 1057 SUPERFAMILY Actin depolymerizing proteins 558 663 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g2038 Aed-Chr6 23142694 23157012 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g2038 - - gmx:100807762 1669.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g2038 6 23142694 23157012 Aed6g2038 6 23142694 23157012 ECH
Aed6g2038 6 23142694 23157012 Aed4g1131 4 10727349 10731310 PCT
Aed4g0831 4 7194449 7206769 Aed6g2038 6 23142694 23157012 PCT