Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g0831 ATGACAACACTTCTCGCATTAGTGGAATTTTGCACAGTGCAGTGCAAAGTCTATGTTGGATGTAAGTTTGAGGATGTGTGTGTTTTCTTCATTGGACTTGAAATATGGCGTATTGAGAATTTTAATCCAGTTCCTGTCCCAAAGTCCTCTTTTGGGAAATTTTTCACTGGAGACTCTTATGTGATCTTAAAGACAACTGCATCAAAAAGTGGTGCTCTGCGCCATGACATCCATTACTGGCTTGGTAAAGACACCAGTCAGGATGAAGCTGGTGCTGCAGCCATCAAGACAGTTGAGCTGGATGCAGCTCTTGGAGGACGTGCTGTTCAGTATCGTGAAGTACAAGGCCATGAAACTGAAAAGTTTCTGTCTTATTTCAAACCATGTATTATCCCTCAAGAAGGTGGAGTTGCTTCTGGTTTCAAACATCCTGAGGCTGAAAAATATAAGACAAGGTTGTTTGTTCCATTTGCTAGAGCTTCACTCAACCATGATGATATTTTTGTTCTGGATACCGAATCGAAAATTTTCCAATTTAATGGTTCCAATTCATCTATTCAAGAAAGGGCTAAAGCTTTGGAAGTTGTACAGTATATTAAGGATACTTACCATGAAGGAAAATGTGAGATAGCTGCTGTTGAGGATGGAAAGTTGATGGCTGATGCTGAAACTGGGGAATTCTGGGGTTTCTTTGGGGGATTTGCTCCTCTTCCACGAAAAACAGCCAGTGATGACGATAAGCCTACTGATTCTCGCCCTCTGAAGCTGCTATGTGTTGAAAAGGGACATGCAGAACCTGTTGAGACTGATTCTTTGAAGAGGGAGTCACTAGACACAAATAAATGCTATATTCTTGATTGTGGGTTTGAAGTATTTGTTTGGATGGGAAGAAATACCTCTCTTGATGAAAGAAAAAGTGCAAGTGGAGTTGCAGATGAGTTAGTCAGTGGCACTGATCAACTGAAACCCCAAATAATTCGTGTGATAGAAGGATTTGAAACAGTGATGTTCAGGTCCAAATTTGATTCTTGGCCTCAGACAACTGATGTAACAGTATCTGAAGATGGTCGTGGCAAGGTAGCAGCACTTCTAAAACGTCAAGGAGTAAATGTAAAGGGCTTGTTGAAAGCTGATCCTGTGAGGGAAGAACCCCAACCCCACATCGATTGCACGGGACATTTGCAGGTTTGGCGTGTGAACGGTCAGGAGAAGATTCTTCTTCAAGCTTCTGATCAGTCAAAATTTTATAGTGGAGATTGCTACATCTTTCAGTATACATATCCTGGAGAGGATAAAGAAGATTGTCTTATAGGAACGTGGATTGGAAAGAATAGTGTTGAGGAAGAACGAGCTTCAGCTAATTCATTGGCTAGCAAAATGGTCGAGTCAATGAAGTTTCTTGCTTCCCAGGCTCGTCTATATGAAGGCAATGAACCAATTCAGTTTTATTCTATCCTCCAAAGCGTCGTTGTTTTTAAGGGTGGGCTTAGTGAAGGATACAAGACTTACATTGCGGAAAAGGAAATTCCTGATGAGACATACAATGAGAATGGTGTTGCATTATTCCGCATCCAGGGCTCTGGACCAGACAATATGCAAGCCATACAAGTTGAACCAGTTGCATCTTCCTTGAATTCTTCTTATTGTTACATACTTCATAATGGGCCTGCTGTCTTTACCTGGTCTGGAAACTCTACAAGTGCAGAAAACCAGGAACTTGTTGAGAGGATGCTGGATTTGATAAAGCCAAATTTACAATCCAAGCCACAGAGGGAAGGTTCTGAATCTGAACAGTTTTGGGATTTGTTAGGAGGAAAATCGGAATATCCCAGTCAAAAGATTCTTAGAGAGCCTGAAAGTGATCCTCACCTATTTTCTTGTCACTTCTTGAAAGCTGACTTGCTTATGATGGTTTTCTTCCACTGCCTGATTGAGCAATGTGCAGGAAATTTAAAGGTGACAGAGGTATACAACTTCTCCCAGGATGATTTGATGACAGAAGACATTTTCATCTTGGATTGTCACTCAGAAATATTTGTCTGGGTTGGCCAGCAGGTTGACTCCAAGAGTAAAATGCAGGCTCTAACAATTGGTGAGAAATTTCTTGAGCATGATTTTCTTCTAGAAAAATTATCTCGTGTAGCTCCAGTATATGTTGTCATGGAAGGGAGTGAGCCACCTTTCTTTACACGCTTCTTTAAATGGGATTCTGCAAAATCTGCAATGCTGGGAAACTCATTTCAAAGGAAGCTGACAATTGTGAAAAGTGGGGGTGCTCCAGTTTTGGATAAACCCAAACGGAGAACACCAGTATCTTATGGGGGAAGGTCAAGTAGCGTGCCAGATAAATCCTCCCAGCGTTCCTCCCGCAGCATGTCTGTCAGTCCCGATCGTGTTCGTGTGAGGGGCAGGTCTCCAGCCTTTAATGCCCTAGCAGCTAATTTTGAGAGCCCCAATTCTCGAAACCTTTCAACCCCGCCTCCAGTAATTAGAAAGCTGTATCCAAAATCTGTGACACCTGATTCTGCAATACTGGCACCAAAATCTTCAGCCATAGCTGCACTCACTTCTTCTTTTGAACAGCCACCTTCAGCACGAGAATCTATGATACCTCGGTCAATTAAAGTAATGCCCAAATCAAACCCTGAGAAAAATGACAAGGAGAATTCTGTGAGCACCAGAGTGGAATCTCTTACCATACAGGAAGATGTGAAAGAGGATGAAGTTGAAGATGAGGAAGGTCTTGAGATTTACCCATATGAACGTATTAAAATATCATCCACTGATCCTGTACCAAGTATTGATGTGACCAAGCGAGAGACTTATCTATCATCTGCGGAATTCAAAGAGAAATTTGCGATGTCCAAGGATGCCTTCTACAAGTTGCCAAAATGGAAACAAAACAAACTCAAAATGGCTGTTCAGTTATTCTGA 2934 0.4179 MTTLLALVEFCTVQCKVYVGCKFEDVCVFFIGLEIWRIENFNPVPVPKSSFGKFFTGDSYVILKTTASKSGALRHDIHYWLGKDTSQDEAGAAAIKTVELDAALGGRAVQYREVQGHETEKFLSYFKPCIIPQEGGVASGFKHPEAEKYKTRLFVPFARASLNHDDIFVLDTESKIFQFNGSNSSIQERAKALEVVQYIKDTYHEGKCEIAAVEDGKLMADAETGEFWGFFGGFAPLPRKTASDDDKPTDSRPLKLLCVEKGHAEPVETDSLKRESLDTNKCYILDCGFEVFVWMGRNTSLDERKSASGVADELVSGTDQLKPQIIRVIEGFETVMFRSKFDSWPQTTDVTVSEDGRGKVAALLKRQGVNVKGLLKADPVREEPQPHIDCTGHLQVWRVNGQEKILLQASDQSKFYSGDCYIFQYTYPGEDKEDCLIGTWIGKNSVEEERASANSLASKMVESMKFLASQARLYEGNEPIQFYSILQSVVVFKGGLSEGYKTYIAEKEIPDETYNENGVALFRIQGSGPDNMQAIQVEPVASSLNSSYCYILHNGPAVFTWSGNSTSAENQELVERMLDLIKPNLQSKPQREGSESEQFWDLLGGKSEYPSQKILREPESDPHLFSCHFLKADLLMMVFFHCLIEQCAGNLKVTEVYNFSQDDLMTEDIFILDCHSEIFVWVGQQVDSKSKMQALTIGEKFLEHDFLLEKLSRVAPVYVVMEGSEPPFFTRFFKWDSAKSAMLGNSFQRKLTIVKSGGAPVLDKPKRRTPVSYGGRSSSVPDKSSQRSSRSMSVSPDRVRVRGRSPAFNALAANFESPNSRNLSTPPPVIRKLYPKSVTPDSAILAPKSSAIAALTSSFEQPPSARESMIPRSIKVMPKSNPEKNDKENSVSTRVESLTIQEDVKEDEVEDEEGLEIYPYERIKISSTDPVPSIDVTKRETYLSSAEFKEKFAMSKDAFYKLPKWKQNKLKMAVQLF 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g0831 977 SUPERFAMILY Actin depolymerizing proteins 382 528 - -
Aed4g0831 977 CDD gelsolin_S5_like 517 608 - -
Aed4g0831 977 Gene3D Severin 29 144 IPR029006 -
Aed4g0831 977 Gene3D Severin 517 613 IPR029006 -
Aed4g0831 977 PANTHER VILLIN-4 32 977 - -
Aed4g0831 977 SMART VILL_6 31 129 IPR007122 GO:0051015
Aed4g0831 977 SMART VILL_6 638 736 IPR007122 GO:0051015
Aed4g0831 977 SMART VILL_6 252 344 IPR007122 GO:0051015
Aed4g0831 977 SMART VILL_6 392 489 IPR007122 GO:0051015
Aed4g0831 977 SMART VILL_6 139 234 IPR007122 GO:0051015
Aed4g0831 977 SMART VILL_6 519 606 IPR007122 GO:0051015
Aed4g0831 977 Pfam Villin headpiece domain 942 977 IPR003128 GO:0003779|GO:0007010
Aed4g0831 977 MobiDBLite consensus disorder prediction 758 801 - -
Aed4g0831 977 CDD gelsolin_S1_like 31 136 - -
Aed4g0831 977 Gene3D Severin 145 247 IPR029006 -
Aed4g0831 977 MobiDBLite consensus disorder prediction 772 795 - -
Aed4g0831 977 ProSiteProfiles Headpiece (HP) domain profile. 912 977 IPR003128 GO:0003779|GO:0007010
Aed4g0831 977 PRINTS Gelsolin family signature 690 709 IPR007122 GO:0051015
Aed4g0831 977 PRINTS Gelsolin family signature 436 454 IPR007122 GO:0051015
Aed4g0831 977 PRINTS Gelsolin family signature 532 552 IPR007122 GO:0051015
Aed4g0831 977 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Aed4g0831 977 PRINTS Gelsolin family signature 469 489 IPR007122 GO:0051015
Aed4g0831 977 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Aed4g0831 977 PRINTS Gelsolin family signature 661 683 IPR007122 GO:0051015
Aed4g0831 977 CDD gelsolin_S4_like 388 485 - -
Aed4g0831 977 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 252 427 IPR036180 -
Aed4g0831 977 CDD gelsolin_S6_like 621 737 - -
Aed4g0831 977 MobiDBLite consensus disorder prediction 876 897 - -
Aed4g0831 977 SUPERFAMILY Actin depolymerizing proteins 31 154 - -
Aed4g0831 977 Gene3D Severin 248 356 IPR029006 -
Aed4g0831 977 SUPERFAMILY Actin depolymerizing proteins 510 614 - -
Aed4g0831 977 Pfam Gelsolin repeat 40 123 IPR007123 -
Aed4g0831 977 Pfam Gelsolin repeat 654 729 IPR007123 -
Aed4g0831 977 Pfam Gelsolin repeat 410 479 IPR007123 -
Aed4g0831 977 Pfam Gelsolin repeat 265 337 IPR007123 -
Aed4g0831 977 Pfam Gelsolin repeat 155 217 IPR007123 -
Aed4g0831 977 Gene3D Severin 615 750 IPR029006 -
Aed4g0831 977 SMART VHP_1 942 977 IPR003128 GO:0003779|GO:0007010
Aed4g0831 977 PANTHER VILLIN 32 977 IPR007122 GO:0051015
Aed4g0831 977 SUPERFAMILY VHP, Villin headpiece domain 902 977 IPR036886 GO:0003779|GO:0007010
Aed4g0831 977 Gene3D Severin 388 502 IPR029006 -
Aed4g0831 977 Gene3D Villin headpiece domain 915 977 IPR036886 GO:0003779|GO:0007010
Aed4g0831 977 SUPERFAMILY Actin depolymerizing proteins 595 734 - -
Aed4g0831 977 CDD gelsolin_S3_like 255 343 - -
Aed4g0831 977 SUPERFAMILY Actin depolymerizing proteins 151 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g0831 Aed-Chr4 7194449 7206769 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g0831 - - gmx:100808499 1731.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed4g0831 4 7194449 7206769 Aed6g2038 6 23142694 23157012 PCT