Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1951 ATGGTTCGTTTCAGCAACAACGTCGTCGGAATCCTGAACTTCCTGACCTTCCTCCTCTCCATCCCGATCCTGGTGGCCGGAGTGTGGCTGAGCAAGCAAGGCGCCACCGAGTGCGAGCGGTGGCTGGAAAAGCCCGTGATAGCGCTGGGTGTCTTTCTGATGCTGGTCTCACTCGCGGGCCTCGTCGGCGCGTGTTGCCGCGTGTCATGGCTCCTCTGGGTGTACCTCCTGGTGATGTTCATCCTGATCGTTCTTCTATTCGCATTCACCATCTTCGCCTTCGTTATCACAAACAAGGGCGCTGGTGAAGCCGTGTCTCACAGAGGCTATAAAGAGTATAGGCTTGGTGATTACTCCAATTGGCTTCAGAAGAGGGTTAACAACGTTAAGACGTGGAACAGGATCAAGAGTTGCTTGCAGTCTGGGAAAGTCTGCACTGATTTCCAATCCAAGTTTCTAAACGACACCGTTAATGATTTTTACAACGAAAACCTTTCCGCGCTTCAGTCTGGATGCTGTAAACCTGCAGAAGTATGCAATTTTACATATGTGAGTCCAACAAACTGGACGAAGCCCGCAGGTGCTACTACTTACACCAACCCTGACTGTGATGCTTGGAATAATGAATCCAATGTTCTGTGCTTCAATTGCCAATCATGCAAGGCTGGCTTACTGCAAAACCTCAAAACAGATTGGAAGAAGGTGGCTGTTGTTAACATCGTGTTCCTTGTCTTCCTCATTATTGTGTACTCCATAGGTTGCTGTGCATTCAGGAACAATAGGAAGGAAAATTGGAAGGGATATTCTCGTTAG 813 0.4871 MVRFSNNVVGILNFLTFLLSIPILVAGVWLSKQGATECERWLEKPVIALGVFLMLVSLAGLVGACCRVSWLLWVYLLVMFILIVLLFAFTIFAFVITNKGAGEAVSHRGYKEYRLGDYSNWLQKRVNNVKTWNRIKSCLQSGKVCTDFQSKFLNDTVNDFYNENLSALQSGCCKPAEVCNFTYVSPTNWTKPAGATTYTNPDCDAWNNESNVLCFNCQSCKAGLLQNLKTDWKKVAVVNIVFLVFLIIVYSIGCCAFRNNRKENWKGYSR 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1951 270 PANTHER TETRASPANIN-8-RELATED 1 267 IPR044991 GO:0009734|GO:0016021
Aed6g1951 270 ProSitePatterns Transmembrane 4 family signature. 50 72 IPR018503 GO:0016021
Aed6g1951 270 Pfam Tetraspanin family 7 256 IPR018499 GO:0016021
Aed6g1951 270 PRINTS Transmembrane four family signature 66 94 - -
Aed6g1951 270 PRINTS Transmembrane four family signature 7 30 - -
Aed6g1951 270 PRINTS Transmembrane four family signature 39 65 - -
Aed6g1951 270 PANTHER BNAA09G41810D PROTEIN 1 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1951 Aed-Chr6 22479385 22481699 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1951 1 270 Miscellaneous Gene Families AT2G23810 67.037 9.17e-136 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1951 - - gsj:114382334 495.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1951 6 22479385 22481699 Aed6g1951 6 22479385 22481699 ECH
Aed6g1951 6 22479385 22481699 Aed10g1296 10 14028215 14029701 PCT