Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1296 ATGTGTCGTTTGAGCAATAACCTGATCGGATTGCTGAATTTGCTGTCCTTCCTTCTCTCGATTCCCATCTTGGTGATGGGCATGTGGCTGAGCTCGCAAGCGGACACGGAATGCGAAAGGTGGCTGCAAACGCCCCTCGTCATGCTCGGGGTCTTCCTTCTTATGATCTCTCTGGCCGGTCTCATTGGGGCGTGCTGTGGCGCCTCGTGCCTCCTCTGCCTCTACCTCTTCGCCATGCTGCTCCTCATCATCCTCCTTTCGGTCTTCACCATCTTTGCCTTCGTTGTCACCAACAATGGCGCCGGCCAGGTCCTGTCCAAGCGTGGCTACCAGGAGTACCGCCTCGGCGACTACTCCAATTGGTTGCAGAACAGAGTGAACAACAACCGCACGTGGACCCGGATTCAGAGCTGCCTCCAGTCTGCCATGCTTTGCTCCCAATACCAAAGGCAGTTTTCCAACGACATCGCGCAGCAGTTCTACGCTGAGAACTTGTCCGCAGTTCAGTCCGGGTGTTGTAAGCCACCAGACGAGTGTAATTTGGCGTTCCTAGGTCCATCTATGTGGAACAAGACACAAGGTGTAAATCATACCAACCCTGATTGTAATGCTTGGGACAATGATCCTAAAGTTTTGTGCTTCAACTGCCAATCTTGCAAGGCAGGGTTCCTACATAACCTCAAGAATGACTGGAAGAAGGTGGCAACTGTCAACATTGTCTTCCTCGTCTTCCTCATGATTGTGTACTCGGTTGGTTGCTGCGCGTTCCGGAATAACATGAGAGGGGGTTGGTGGTAG 798 0.5263 MCRLSNNLIGLLNLLSFLLSIPILVMGMWLSSQADTECERWLQTPLVMLGVFLLMISLAGLIGACCGASCLLCLYLFAMLLLIILLSVFTIFAFVVTNNGAGQVLSKRGYQEYRLGDYSNWLQNRVNNNRTWTRIQSCLQSAMLCSQYQRQFSNDIAQQFYAENLSAVQSGCCKPPDECNLAFLGPSMWNKTQGVNHTNPDCNAWDNDPKVLCFNCQSCKAGFLHNLKNDWKKVATVNIVFLVFLMIVYSVGCCAFRNNMRGGWW 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1296 265 Pfam Tetraspanin family 7 255 IPR018499 GO:0016021
Aed10g1296 265 ProSitePatterns Transmembrane 4 family signature. 50 72 IPR018503 GO:0016021
Aed10g1296 265 PANTHER TETRASPANIN-8-RELATED 1 261 IPR044991 GO:0009734|GO:0016021
Aed10g1296 265 PANTHER TETRASPANIN-8 1 261 - -
Aed10g1296 265 PRINTS Transmembrane four family signature 39 65 - -
Aed10g1296 265 PRINTS Transmembrane four family signature 7 30 - -
Aed10g1296 265 PRINTS Transmembrane four family signature 66 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1296 Aed-Chr10 14028215 14029701 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1296 1 264 Miscellaneous Gene Families AT4G28050 59.848 3.05e-120 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1296 - - gmx:100791287 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1951 6 22479385 22481699 Aed10g1296 10 14028215 14029701 PCT