Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1836 ATGGGTTCTCAGATAAGGCTTCTGGGTCTGTGTCTATGGATGTACTTGGCATGCTTGAGTTTCATTGGAGTGGGTGCTGTGAATGGAAGAGAAGGTGAAGTTGTGACAGGGATTGCTTTAGTTCATGGGAAAACTTCTATTGGAAGGATTGATGATGATTTTATCTGTGCAACAATGGATTGGTGGCCTCCTCAGAAATGTGACTATGGAAAATGCAGTTGGGGTCATGCTTCTCTTCTCAATCTGGACCTCAACAACAAAATTTTGTTAAATGCAGTAAAAGCCTTTTCACCCTTGAAAATTAGATTAGGTGGCACTTTGCAAGACAAGGTCATATATGGAACTGAAGATAATCGACACCTCTGTACTCCTTTTGTTTTGAATGCTAATGAAATGTTTGGTTTCACTCAAGGGTGCTTACCGATGTATAGGTGGGATGAGCTAAACAGCTTTTTCCAAAAAGCAGGGGCTAAGATTGTTTTTGGATTAAATGCTCTTGCTGGAAAATCTATGAAGTCTGGTTCTGCTATTGGACCTTGGAACTGCACCAATGCTGATTCTTTAATACGGTACACAGTCAGAAAGAAGTACACCATTCATGGTTGGGAACTTGGCAATGAATTGTGTGGAATTGGAATTGGAGCAAGTGTTGCAGCAGATCAATATGCTTCTGATGTAGCTGCTTTAAGAAATATAGTTGAAAATGAATATAGAGGGATTGCATCAAAGCCACTAGTCATTGCACCTGGAGGCTTCTTTGACGCAGATTGGTTCAAGGAATTTATAAGCAAATCTGGTAAATCTGCAGACGTGGTCACTCACCACATTTATAACCTTGGGCCAGGAGTAGATGACGGTATAACTGAAAAAATTCTTGACCCTTCCTATCTGGATGGAGAGGCTAACACATTCAGTAGCCTCAAAGGTATAATTCAAAGATCAGCAACCTCAGTGAAATCGTGGGTTGGTGAGGCCGGAGGGGCTTACAACAGTGGTCATCATCTTGTGTCTGATGCATTTGTCTACAGCTTCTGGTATTTGGACCAGCTTGGTATGTCAGCTGTTTATGACACCAGAGCATACTGCAGACAATGTTTGATAGGAGGAAACTATGGTTTGCTGAATACTACTACTTTCATGCCAAATCCAGACTATTATAGTGCACTTCTATGGCACCGACTCATGGGAGGACGTGTCCTTTCAACTAGCTTCTACGGGACAAAGAAGATAAGAACTTATGCACATTGTGCAAAGGAATCCAAAGGAATCACAATACTAGTGCTCAACTTGGACAACAGCACCACTGTTCAAGTGAGTGTGGCCTTAAAATTTAACAAGTTACCATACAGTAGAGTGGGTGAACCAGCCAGAAGAGAGTATCATTTAACAGCACCTGACAGGAATTTACATAGCCAAACCATGTTGCTAAATGGAAAAATCTTAAGTGTAAACTCAGCTGGTGAAATCCCTCCTTTGGAGCCTCTATATGTAAACTCAAGAAAGCCAATAATAGTTGGTCCTCTATCTATTGTATTTGCTCATATACCAAATGTTCTTCTTTCGGCCTGCACCTAG 1575 0.4127 MGSQIRLLGLCLWMYLACLSFIGVGAVNGREGEVVTGIALVHGKTSIGRIDDDFICATMDWWPPQKCDYGKCSWGHASLLNLDLNNKILLNAVKAFSPLKIRLGGTLQDKVIYGTEDNRHLCTPFVLNANEMFGFTQGCLPMYRWDELNSFFQKAGAKIVFGLNALAGKSMKSGSAIGPWNCTNADSLIRYTVRKKYTIHGWELGNELCGIGIGASVAADQYASDVAALRNIVENEYRGIASKPLVIAPGGFFDADWFKEFISKSGKSADVVTHHIYNLGPGVDDGITEKILDPSYLDGEANTFSSLKGIIQRSATSVKSWVGEAGGAYNSGHHLVSDAFVYSFWYLDQLGMSAVYDTRAYCRQCLIGGNYGLLNTTTFMPNPDYYSALLWHRLMGGRVLSTSFYGTKKIRTYAHCAKESKGITILVLNLDNSTTVQVSVALKFNKLPYSRVGEPARREYHLTAPDRNLHSQTMLLNGKILSVNSAGEIPPLEPLYVNSRKPIIVGPLSIVFAHIPNVLLSACT 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1836 524 Pfam Glycosyl hydrolase family 79, N-terminal domain 40 351 IPR005199 GO:0016020|GO:0016798
Aed6g1836 524 Gene3D Glycosidases 72 393 - -
Aed6g1836 524 SUPERFAMILY (Trans)glycosidases 50 395 IPR017853 -
Aed6g1836 524 PANTHER HEPARANASE-LIKE PROTEIN 3 3 523 - -
Aed6g1836 524 PANTHER HEPARANASE-RELATED 3 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1836 Aed-Chr6 21681450 21686058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1836 8 524 Glycoside Hydrolase AT5G61250 45.941 6.95e-171 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1836 K07964 - gmx:100778008 1002.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1836 6 21681450 21686058 Aed6g1836 6 21681450 21686058 ECH
Aed6g1836 6 21681450 21686058 Aed4g1109 4 10419534 10424753 PCT