Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed4g1109 ATGGGTTCTCGAATTCACCTTCTTGGTCTCTGCCTATGCTTCACCTTCATTTTTGGTAACATAGCAGTGAGTGTGAGAGGAGATGATGATGCTGCAACAACAACTGTGCAAGGCACTGTTTCCATTGATGAGAAAGCTGTGATTGGAACCATTGATGATGATTTTGTTTGTGCTACTTTGGATTGGTGGCCTCCTGAGAAATGTGACTATGGAACATGCAGTTGGGGCCTTGCTTCTCTTCTCAATCTGGACCTCAACAACAAGATTTTCTTAAATGCAGTGAAAGCCTTTTCACCCTTGAAAATTAGATTAGGTGGAAGTTTGCAAGACAAGGTAATATATGGCACTGAGGATTACCACCAATCTTGTACTCCTTTTGCTAAGAGCCCTTCTGAGATGTTTGGACCTTGGAACTACACCAATGCTGAGTCCTTTATTCGATACACTGTTGAAAATGGCTACAACATTTTTGGATGGGAACTTGGCAATGAATTGAGTGGGAGTGGAGTTGGAACAAAAATTAGTGCAGAGCAATATGCTTATGATCTTTCTGCTTTGCACAACGTTGTTTACAAAGCATATGAAAAGATTGAGCCTAAGCCGCTAGTCATTGCACCCGGCGGTTTCTTTGATGCAAACTGGTTCAACAAATTTATAATCAAATCTGGAAAATCTCTGGATGTGGTCACCCACCACATTTATAACCTTGGACCAGGAGTCGATGAGCACCTTGTGGAGAAAATTCTGGACCCTTCCTATCTTGATAAAGAGGCTAGCACATTCAGTGGCCTCAAAAAGTTAATTGCAAGTACAGGTACCTTGGCAACAGCATGGGTTGGCGATGCTCTTCTTTGGCACCGGCTCATGGGAAGACACAAAGGAATAACAGTACTATTGATCAACCTAGACAGCAACACAACTGTTGAAGCTGAAGTGACCCTCAACAACAACAACAATGGCAAGAGTTTGAGGCAAAGAAAGATGTCTACTAGTCCTTCAAAAACGATGGAACTCCCTCTTGCAAGTGAAACAACAGCAAGAGAAGAGTACCATCTAACTCCACAAGATGGTGACATACATAGCCAAATCATGTTACTAAATGGAAATGCTCTGAGTGTGACTTCAGATGGTGATATTCCTCCTTTGAAGCCTATTTATGTGAACTCGTCATCATCAGAGCCAATAAGGGTTGCTCCTTTCTCTATTGTGTTTGCACATTTGCCTGATGCTGTTGTTGCTGCTTGTGGCTAA 1251 0.4229 MGSRIHLLGLCLCFTFIFGNIAVSVRGDDDAATTTVQGTVSIDEKAVIGTIDDDFVCATLDWWPPEKCDYGTCSWGLASLLNLDLNNKIFLNAVKAFSPLKIRLGGSLQDKVIYGTEDYHQSCTPFAKSPSEMFGPWNYTNAESFIRYTVENGYNIFGWELGNELSGSGVGTKISAEQYAYDLSALHNVVYKAYEKIEPKPLVIAPGGFFDANWFNKFIIKSGKSLDVVTHHIYNLGPGVDEHLVEKILDPSYLDKEASTFSGLKKLIASTGTLATAWVGDALLWHRLMGRHKGITVLLINLDSNTTVEAEVTLNNNNNGKSLRQRKMSTSPSKTMELPLASETTAREEYHLTPQDGDIHSQIMLLNGNALSVTSDGDIPPLKPIYVNSSSSEPIRVAPFSIVFAHLPDAVVAACG 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed4g1109 416 Pfam Glycosyl hydrolase family 79, N-terminal domain 133 282 IPR005199 GO:0016020|GO:0016798
Aed4g1109 416 PANTHER HEPARANASE-LIKE PROTEIN 3 135 282 - -
Aed4g1109 416 PANTHER HEPARANASE-LIKE PROTEIN 3 292 415 - -
Aed4g1109 416 PANTHER HEPARANASE-LIKE PROTEIN 3 8 135 - -
Aed4g1109 416 Gene3D Glycosidases 72 282 - -
Aed4g1109 416 PANTHER HEPARANASE-RELATED 135 282 - -
Aed4g1109 416 PANTHER HEPARANASE-RELATED 292 415 - -
Aed4g1109 416 PANTHER HEPARANASE-RELATED 8 135 - -
Aed4g1109 416 SUPERFAMILY (Trans)glycosidases 51 288 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed4g1109 Aed-Chr4 10419534 10424753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed4g1109 282 415 Glycoside Hydrolase AT5G61250 37.267 3.18e-19 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed4g1109 K07964 - gmx:100802477 474.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1836 6 21681450 21686058 Aed4g1109 4 10419534 10424753 PCT