Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1749 ATGATGGAACCAAAAATTCTTGTAACTTACAACTTGAACTGTGGATTATTGATCAGGAAAATGAGCTGGTCTGGAGGAGATTGGATGTGTGGTGTTTGCGAGCACATAAATTTCAAGAAGAGGGAAGCATGCCAGAGTTGTGGATACCCTAAGTATGGGGGTCCTGACCCTTCAACCTACAGATACAACAGGACTGAAGCTTTGGCAGGGGACTGGTTTTGCAACTGTGGTGCTCACAACTATGCCAGTCGATCAAGCTGCTACAGATGTAGCACAATGAAAGATGGTTACTCTTCGGGATATGCCAACAACTCTGGTGGATATGGATCTGACACTTTCCCCCCAGGATGGAAGACTGGAGATTGGCTTTGCCCAAGACTTGGATGTGGAGTGCATAATTATGCTAGCAGGACAGAATGCTATAAATGCAAAATGCCAAGGGATTTTGGTGAGAAAAATTTAGTGTTGTTTCATCTGTTCCTTTTGAAAAATATGGAGGTGCAGACTGAAACAAGAAATTTCACAAGACCCCCAATATCACTGATTTCTCCCTTGGTGTCTTTCTTCTCCTAA 573 0.4328 MMEPKILVTYNLNCGLLIRKMSWSGGDWMCGVCEHINFKKREACQSCGYPKYGGPDPSTYRYNRTEALAGDWFCNCGAHNYASRSSCYRCSTMKDGYSSGYANNSGGYGSDTFPPGWKTGDWLCPRLGCGVHNYASRTECYKCKMPRDFGEKNLVLFHLFLLKNMEVQTETRNFTRPPISLISPLVSFFS 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1749 190 SUPERFAMILY Ran binding protein zinc finger-like 112 149 IPR036443 -
Aed6g1749 190 ProSitePatterns Zinc finger RanBP2-type signature. 28 47 IPR001876 -
Aed6g1749 190 Pfam Zn-finger in Ran binding protein and others 26 52 IPR001876 -
Aed6g1749 190 Pfam Zn-finger in Ran binding protein and others 69 94 IPR001876 -
Aed6g1749 190 Pfam Zn-finger in Ran binding protein and others 118 146 IPR001876 -
Aed6g1749 190 ProSiteProfiles Zinc finger RanBP2 type profile. 24 53 IPR001876 -
Aed6g1749 190 PANTHER ZINC FINGER PROTEIN 13 152 - -
Aed6g1749 190 SUPERFAMILY Ran binding protein zinc finger-like 66 96 IPR036443 -
Aed6g1749 190 Gene3D - 18 55 - -
Aed6g1749 190 Gene3D - 113 149 - -
Aed6g1749 190 Gene3D - 62 96 - -
Aed6g1749 190 ProSitePatterns Zinc finger RanBP2-type signature. 122 143 IPR001876 -
Aed6g1749 190 PANTHER ZINC FINGER, RANBP2-TYPE-RELATED 13 152 - -
Aed6g1749 190 ProSiteProfiles Zinc finger RanBP2 type profile. 118 149 IPR001876 -
Aed6g1749 190 SUPERFAMILY Ran binding protein zinc finger-like 21 54 IPR036443 -
Aed6g1749 190 SMART zf_4 26 50 IPR001876 -
Aed6g1749 190 SMART zf_4 70 93 IPR001876 -
Aed6g1749 190 SMART zf_4 120 146 IPR001876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1749 Aed-Chr6 21063049 21064596 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1749 - - gmx:100780120 283.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1239 10 12497580 12498529 Aed6g1749 6 21063049 21064596 PCT