Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1740 ATGGGAGTGGAGGAGAACAACGCCTCTAACTCCATCGACGAAGAACACAGCAAAATCAACACGTTTGTGCTCTTGAATGTCTACGATCTCACCCCTGTCAATAATTACGTCTACTGGTTTGGATTTGGCATCTTTCACTCTGGCATTGAAGTGCATGGTAAGGAGTATGGATTTGGAGCCCATGACTTCCCAGCTAGTGGAGTTTTTGAAGTGGAGCCAAGGAAGTGCCCTGGATTCATATATAGATGTTCCATCACTTTGGGACAAACCAATATGAATCCTTCTGAGTTCCGTACATTTATTGAAAACATGGCTTCTGAGTATCATGGGGATACCTATCACCTTATAACTAAGAACTGCAATCATTTTACAGACGATCTCTGCTATAGATTGACTGGGAAACAAGTCCCAGGTTGGGTGAATAGGCTTGCGAAGCTAGGTGCTTTGTGCAGTTGTCTACTTCCTGAAAGTCTTCAAGTAACAAGTGTTAAACAGCTGCCTGAATACCATGAATGTTCGGAAGATGAATTTGTTGAATCTCTTTCTCTTTCACCTGCCACGCCCCGTGAATCAACAGAAATAGATGATGAACAAGAAAAGCACCTTCTTTCGTCATCAGCTGGAACTGAGGACGTTACATTCGTTAAAGAGACCCAAGTAAAATGA 666 0.4264 MGVEENNASNSIDEEHSKINTFVLLNVYDLTPVNNYVYWFGFGIFHSGIEVHGKEYGFGAHDFPASGVFEVEPRKCPGFIYRCSITLGQTNMNPSEFRTFIENMASEYHGDTYHLITKNCNHFTDDLCYRLTGKQVPGWVNRLAKLGALCSCLLPESLQVTSVKQLPEYHECSEDEFVESLSLSPATPRESTEIDDEQEKHLLSSSAGTEDVTFVKETQVK 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1740 221 PANTHER THIOL PEPTIDASE FAMILY PROTEIN, PUTATIVE-RELATED 13 221 - -
Aed6g1740 221 MobiDBLite consensus disorder prediction 190 204 - -
Aed6g1740 221 Pfam PPPDE putative peptidase domain 23 155 IPR008580 GO:0008233
Aed6g1740 221 Gene3D PPPDE domains 16 172 IPR042266 -
Aed6g1740 221 ProSiteProfiles PPPDE domain profile. 21 158 IPR008580 GO:0008233
Aed6g1740 221 SMART DUF862_2a 21 159 IPR008580 GO:0008233
Aed6g1740 221 PANTHER DESUMOYLATING ISOPEPTIDASE 13 221 IPR008580 GO:0008233
Aed6g1740 221 MobiDBLite consensus disorder prediction 180 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1740 Aed-Chr6 21014004 21017234 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1740 K22763 - gmx:100778961 407.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1740 6 21014004 21017234 Aed6g1740 6 21014004 21017234 ECH
Aed6g1740 6 21014004 21017234 Aed10g1232 10 12344831 12348320 PCT