Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1232 ATGGGGGCATCAAAGAACAACTCTAATTCTACCTCAAAATCCGATAGCAATGCTAATGACAAAGACAAAAAAGACAAAACCACACGTGTGGTGTTAAATGTCTACGACCTCACCCCTCTCAACAATTACCTTTATTGGTTTGGTTTTGGTATCTTTCACTCCGGCATTGAAGCAAGTGGAGTATTTGAAGTGGAGCCAAGGAAGTGCCCTGGATTTGTATACAGATGTTCTATTAATTTAGGCCATGTAAGCATGCAACCTTCTGAGTTTAGGGCATTCATTGAGAGTATTGCTGATGAGTATCATGGGGATACCTATCACCTTATTTCTAAGAATTGCAATCACTTCACCGATGATATGTCACGTAGATTGAGTGGAAAACATATCCCAGGTTGGGTCAATCGTCTTGCAAGACTAGAGACTCTTTCGACTGCATCGCCTTGCGGATCTCGATCAGCATCAGGAGGATTAGACGATGAGCATGAAAAGCGCCTTCTGTCACCTTTGGCGAGTAAAACAGAAAATGTTTCATTCGTTAAGGAGGCCACAAAAAAATGA 558 0.4176 MGASKNNSNSTSKSDSNANDKDKKDKTTRVVLNVYDLTPLNNYLYWFGFGIFHSGIEASGVFEVEPRKCPGFVYRCSINLGHVSMQPSEFRAFIESIADEYHGDTYHLISKNCNHFTDDMSRRLSGKHIPGWVNRLARLETLSTASPCGSRSASGGLDDEHEKRLLSPLASKTENVSFVKEATKK 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1232 185 MobiDBLite consensus disorder prediction 1 24 - -
Aed10g1232 185 PANTHER DESUMOYLATING ISOPEPTIDASE 15 143 IPR008580 GO:0008233
Aed10g1232 185 PANTHER THIOL PEPTIDASE FAMILY PROTEIN, PUTATIVE-RELATED 15 143 - -
Aed10g1232 185 MobiDBLite consensus disorder prediction 1 15 - -
Aed10g1232 185 ProSiteProfiles PPPDE domain profile. 28 155 IPR008580 GO:0008233
Aed10g1232 185 Gene3D PPPDE domains 22 154 IPR042266 -
Aed10g1232 185 SMART DUF862_2a 28 158 IPR008580 GO:0008233
Aed10g1232 185 Pfam PPPDE putative peptidase domain 29 143 IPR008580 GO:0008233
Aed10g1232 185 MobiDBLite consensus disorder prediction 146 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1232 Aed-Chr10 12344831 12348320 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1232 K22763 - gmx:100810582 261.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1232 10 12344831 12348320 Aed10g1232 10 12344831 12348320 ECH
Aed6g1740 6 21014004 21017234 Aed10g1232 10 12344831 12348320 PCT