Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1664 ATGTCACGCACTCGCATTGCCATTCACCGCTTCCGCCACACCTACACCGTGTTGTCGTCAATCCTATCATCACCTGCACTTACTCGCTCTCAATTCCAATGCCCTCAACAATATCATCTCACGCGCGCACCTCTCTCCTTCCACTTCCACGCTCCTCGTTATTCTTCTTCTTCCCCCAAACAAGACTTAGTCGATGGCGACGAAGAGCACTATCCCACCGGAGACTTTGATTTCAAGCCCATCACAGGCTGGAAAAACTTCACCGCCAAGCTCAAGATGCTAATGGCTTTCCCCTGGGAGCGTCTCCGATACGGCACCGTTTTGACAATCAAGTTGCGCGGCCAGATATCGGATCAGCTCAAGAGTAGATTCTCCTCGGGATTATCTCTGCCTCAAATCTGCGATAATTTCTTCAAGGCTGCTCACGATCCTCGAATTTCCGGCATCTATCTCCATATTGATATTTTAAACTGTGGTTGGGCAAAGGAAAATTTGTTGTGGCTTATGTCCCTTCATGTCGAGAAAAAGAATATTATATTGCGTGCGCCTGTGAAGAGATATATGCCCCTCCAAAATCTTGGAATTGAACCAGAAGTGGAAAGGCTTGGCAAATACAAAAGTATAGGAGATCAACTTACCCGTAGAACCATGTCTGAACATCATCATGAGATGCTTACTGCATTGCTTGATAATATCTATACAAATTGGCTGGACAAAGTCTCTTCTGCTAGAGGAAAGAAAAGAGAAGATATAGAGAACTTCATAAATGAAGGTGTCTATCAAGTAGATAGACTTAAAGAAGAGGGCTTCATATCAGACATAATCTATGATGATGAGGTTCTCACTCGGTTAAAGGAGAGACTTCAAGTTAAAACAGATAAAAATCTGCCTATGGTTGATAACAGAAAATACTCTGGAGTTAGGAAATCAACTCTTGGACTATCAGGTGGTAAAGAATTAATAGCCATCATCCGAGCTTCAGGGAGTATCCGTCGTATTGAGAGTCCATTAAGTACCCGCAGCTCTGGTATCATTGGAGAGAAGTTAATTGAGAAGATACGCAAAGTTAGAGAGTCAAATAAATACAAGGCTGTTATTATCCGAATTGACAGTCCAGGAGGGGATGCTCTTGCTTCTGATTTGATGTGGAGGGAAATCAGGCTTTTGGCTGCCTCAAAGCCAGTCATTGCTTCAATGTCTGATGTGGCAGCAAGTGGAGGGTACTACATGGCAATGGGAGCAGGAGTTATTGTTGCAGAAAATCTTACCTTAACTGGTTCAATTGGAGTGGTCACAGGAAAAATTAATCTTGGGAAACTTTATGAGAAGATTGGCTTCAACAAAGAAATCATATCGAGGGGTAGATTTGCTGAGCTCCATGCAGCTGAACAGCGATCTTTAAGACCAGATGAAGCAGAGCTATTTTCCAAGTCTGCACAGCATGCTTATAAACAATTTCGAGATAAGGCAGCTTTATCCAGATATATGACTGTAGACAAGATGGAAGAGGTTGCACAGGGAAGGGTTTGGACTGGTAAGGATGCAGCTTCTCGCGGTTTGGTTAATGTTGTGGAGCTCTCTAGACCCAGTCCTTCTCTACCCGAGATTTTAAGTGGTCTAGGTAATTCTCTCGTTGGAGTAGACACAACTTTAAATGAATTACTACAGGACTTGACATTTTCCCGTGGAGTCCAGGCACGAATGGACGGAATCATGTTTGAGAAATTGGAAGGATATCCATATGCCAACCCCATTTTGGCATTGATAAAAGATTATCTCAGTTCCCTGTAG 1791 0.4327 MSRTRIAIHRFRHTYTVLSSILSSPALTRSQFQCPQQYHLTRAPLSFHFHAPRYSSSSPKQDLVDGDEEHYPTGDFDFKPITGWKNFTAKLKMLMAFPWERLRYGTVLTIKLRGQISDQLKSRFSSGLSLPQICDNFFKAAHDPRISGIYLHIDILNCGWAKENLLWLMSLHVEKKNIILRAPVKRYMPLQNLGIEPEVERLGKYKSIGDQLTRRTMSEHHHEMLTALLDNIYTNWLDKVSSARGKKREDIENFINEGVYQVDRLKEEGFISDIIYDDEVLTRLKERLQVKTDKNLPMVDNRKYSGVRKSTLGLSGGKELIAIIRASGSIRRIESPLSTRSSGIIGEKLIEKIRKVRESNKYKAVIIRIDSPGGDALASDLMWREIRLLAASKPVIASMSDVAASGGYYMAMGAGVIVAENLTLTGSIGVVTGKINLGKLYEKIGFNKEIISRGRFAELHAAEQRSLRPDEAELFSKSAQHAYKQFRDKAALSRYMTVDKMEEVAQGRVWTGKDAASRGLVNVVELSRPSPSLPEILSGLGNSLVGVDTTLNELLQDLTFSRGVQARMDGIMFEKLEGYPYANPILALIKDYLSSL 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1664 596 PIRSF Protease_4_SppA 187 524 IPR004634 GO:0006465|GO:0008233|GO:0016021
Aed6g1664 596 PIRSF Protease_4_SppA 521 596 IPR004634 GO:0006465|GO:0008233|GO:0016021
Aed6g1664 596 PIRSF Protease_4_SppA 45 180 IPR004634 GO:0006465|GO:0008233|GO:0016021
Aed6g1664 596 Gene3D - 188 245 - -
Aed6g1664 596 PANTHER PROTEASE 4 190 595 - -
Aed6g1664 596 PANTHER PROTEASE 4 49 162 - -
Aed6g1664 596 TIGRFAM SppA_dom: signal peptide peptidase SppA, 36K type 322 523 IPR004635 GO:0006508|GO:0008233
Aed6g1664 596 Gene3D - 471 525 - -
Aed6g1664 596 CDD S49_Sppa_N_C 321 521 IPR002142 GO:0006508|GO:0008233
Aed6g1664 596 Pfam Peptidase family S49 190 290 IPR002142 GO:0006508|GO:0008233
Aed6g1664 596 Pfam Peptidase family S49 389 525 IPR002142 GO:0006508|GO:0008233
Aed6g1664 596 SUPERFAMILY ClpP/crotonase 95 279 IPR029045 -
Aed6g1664 596 Gene3D - 317 468 - -
Aed6g1664 596 SUPERFAMILY ClpP/crotonase 323 524 IPR029045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1664 Aed-Chr6 20452652 20458731 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1664 K04773 - gmx:100809623 949.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1664 6 20452652 20458731 Aed6g1664 6 20452652 20458731 ECH
Aed6g1664 6 20452652 20458731 Aed10g1167 10 10997514 11010471 PCT