Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1623 ATGGCTGCTCTAACTCTAGCACTGCTTCTTTTGGCTTTCGCTGGCACTTCAAGTGCAAATTGGTGCGTTTGCAAGGACGGAAGCGACGCGATCCTGCAGAAGACATTGGACTATGCTTGTGGAGCTGGCGCTGACTGCAACCCTCTCCACCAAAATGGGCCTTGCTTCCAGCCCAACACCGTTAGGGCCCACTGTAACTACGCTGTCAACAGCTTCTTCCAAAGGAAGGGTCAAGTTCAAGGCTCCTGCGACTTTGCTGGAACCGCCACTGTTACTGCATCTGACCCTAGCGCTAGCGGTTGTGCCTACCCTTCTACCGTCAGCGCTGCAGGCACTGGTACAACTCCTGTGACTACAACACCAACCATGGGCACCACTCCTACCACTGGAATTCCATCAACAAGCACGGGCACGGGCACGGGGACGGGCACGGGCACGGGAACCGGCACCACCGGCACTACTCCATACAGCACAACACCTGGAGTATTAGGAGGCATTGGCAGTGGCATGGGACCTTCAGGATCTGGCATGAATGATGAAAGTCACGGTGGCCTTAGACTTGTAGACAGCAGCACTAGTTTCACTTTCTTCTCAATCTCCCTCTTCTCTGTCTTCATGATGCTCTGCTGGGGTTGA 636 0.5456 MAALTLALLLLAFAGTSSANWCVCKDGSDAILQKTLDYACGAGADCNPLHQNGPCFQPNTVRAHCNYAVNSFFQRKGQVQGSCDFAGTATVTASDPSASGCAYPSTVSAAGTGTTPVTTTPTMGTTPTTGIPSTSTGTGTGTGTGTGTGTTGTTPYSTTPGVLGGIGSGMGPSGSGMNDESHGGLRLVDSSTSFTFFSISLFSVFMMLCWG 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1623 211 MobiDBLite consensus disorder prediction 112 158 - -
Aed6g1623 211 Gene3D - 15 112 - -
Aed6g1623 211 Pfam X8 domain 21 90 IPR012946 -
Aed6g1623 211 SMART X8_cls 20 103 IPR012946 -
Aed6g1623 211 PANTHER BETA-1,3 GLUCANASE 1 202 IPR044788 -
Aed6g1623 211 PANTHER PLASMODESMATA CALLOSE-BINDING PROTEIN 3 1 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1623 Aed-Chr6 20144901 20149193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1623 16 104 Glycoside Hydrolase AT4G34480 45.556 3.33e-22 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1623 - - gmx:100500078 268.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1118 10 10300050 10306319 Aed6g1623 6 20144901 20149193 ECH
Aed6g1623 6 20144901 20149193 Aed6g1623 6 20144901 20149193 ECH